Gene Slin_6564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6564 
Symbol 
ID8730350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7966911 
End bp7967471 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391320 
Protein GI284041390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.126612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCCCCTTCCA AACCAACTCA TTCATTCCCC GACGGGAGGC TTTGCAGCGA 
CTCGCTTTGC TGGTTGGCAG TACCCTGTCG CTACCAGTAC AGGCAGCTTT ACGGGGCGAA
GTCATTAGCG TTACCGCCGA CCGGTTTTCG GCGGAACAGC AAACGCTCAT TGCCGATCTG
GCCGATGTGA TTATTCCCAC CACCGATACG CCCGGTGCCA AAGCCGCCGG TGTTGGCGAG
TTTATCGAAT ACGTTATGGG GCATTGCAGC GCTGCAAGCC AGCAGGAAGC GTTTCGGCAG
GGGCTACAAC AAACCGACGT ACTAAGCCGC TCAACTTTTG GAAAGTCCTT TTCCGAGCTG
ACCCGTCCGC AGCAAACCGA CATTGTTACC CAGTTGACCA AGCTACAGAA GCCATTTTTC
CAGAGCCTGC GTGAGCTAAC CATCGTTGGT TACTTCACCT CCGAAACAGG CGCTACCCAG
GCCCTGGACT ACGTATCTAT CCCCGGCCGT TTTCAGGGAG ACATCCCGAT GAAGGCAGGC
CAGAAAGCGT GGGCGGTATG A
 
Protein sequence
MSTPPFQTNS FIPRREALQR LALLVGSTLS LPVQAALRGE VISVTADRFS AEQQTLIADL 
ADVIIPTTDT PGAKAAGVGE FIEYVMGHCS AASQQEAFRQ GLQQTDVLSR STFGKSFSEL
TRPQQTDIVT QLTKLQKPFF QSLRELTIVG YFTSETGATQ ALDYVSIPGR FQGDIPMKAG
QKAWAV