Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6563 |
Symbol | |
ID | 8730349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7965064 |
End bp | 7966773 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_003391319 |
Protein GI | 284041389 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0955213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCTTA CAATCGACGC AAAAAAAGAA ATGACCTACG ACGCCATCGT GATTGGGTCG GGGGTTAGCG GAGGCTGGGC CGCTAAAGAA CTAACCGAGA AAGGATTACG GGTACTTATG CTCGAACGAG GTCGCCCGCT GGAGCACGTA ACGGGTTACG AAGATGCTCT GAAAGGGCCC TGGCAAATGC CCGAAACGAG CCGCCTGGGC GATCTGGCAC CCCGCTACCC GCAGGCACCG CAGGACTCGA CCCTGGCCAA AAGTGCCCAG AGTTACTGGA TGCCCGGTGC GGATACCTCC TACCGGCAGG ATAAACCCTT CCGCTGGCTG AGACCCGGTA TCGTGGGCGG GAAATCTATC ATGTGGGGGC GGCAGTCGTA CCGATTCAGC GATATTGACT TTGACGCCAA TGCCCGCGAA GGCGTTGGCG TCGATTGGCC CATCCGCTAC AAAGACATTG CCCCCTGGTA TTCGTACGTC GAGAAGATAG CCGGTATCTC GGGCGAAAAG TTAGGCTTAC CGCAGCTGCC CGATAGCGAG TTCCTGCCGC CTATGGACAT GTTTCTGGTC GAAAAAGAAG TGCGAAAACG GATCGAGAAA AACTTTCCGG GGCGGATCAT GACCATTGGC CGAACTGCTA ATCTATCCGA AGCCCGGAAA ATACAGATGG ACAGTGGCCG GGCCTCCTGC CAGTACCGCA ACCAGTGCAT ACGCGGGTGT CCTTACGGTG GTTATTTTAG TACTCAATCC TGTACGCTGC CCCCGGCGGT GAAAACCGGC CGACTGACAC TGCGTCCGCA TTCGGTAGTA ACCGAGATCA TGCACGACGC GCAAAAACAG CGGGCAACAG GCGTGCGGGT AGTCGACTCC GAAACGCTGG AACACCGCGA GTATTTTGCC AAAGTCATCT TCGTTTGTGC CAGTGCCATG GCTTCTACGG CCCTGCTTAT GAACTCGGTA TCGGATCGCT ATCCCAATGG CATGGGGAAC GACTCGGGGC AGTTGGGGCA CAATCTGATG GACCACCACT TCCGGATTGG CGCTTCGGGC GTGTGGGAAG GCGGTGAAGA CCGGTATTTT TACGGCCGAC GGGCCAACGG TATCTACATT CCCCGTTACC GAAACATCGG AACCGACAAA CGCGACTACC TGCGTGGCTT CGGCTATCAG GGCGGAGGTG GGCGACAAGG TTGGCAACGC AGCGTTGCCG AACTATCTTT CGGTGCATCG CTGAAAGAAG AACTGACCCA CCCCGGCCTA TGGACGATGG GGCTGATCGG GTTTGGCGAG CAACTGCCCG AATACCGAAA CCGCATGTAT CTGGACAAAA CCCAGTTGGA TAAGTGGGGC ATGCCAACGG TGGCTTTCGA CGCCGAGATC GGCGAAAACG AGCGAAAAAT GCGCATCGAC ATGCTCAACG ACGCGCAGGA AATGCTGCAA TCGGCGGGGA TAAGCAACGT AAAAGGCTAT GATCAGGGGT CGGTTGTGGG CGGGGCCGTT CACGAAATGG GCACCGCCCG GATGGGCCGC GATCCCAAAA CCTCCGTGCT TAACGCCCAC AATCAGATTC ATACCGTCAA GAACGTATTT GTCCCCGATG GTGCCTGCAT GACCTCGTCG GGCTGCGTCA ATCCGTCGTT GACGTACATG GCCCTATCGG CACGCGCTGC CGACTTTGCC GTTCGGGAGT TAAAAGCCCG CCGACTTTAA
|
Protein sequence | MHLTIDAKKE MTYDAIVIGS GVSGGWAAKE LTEKGLRVLM LERGRPLEHV TGYEDALKGP WQMPETSRLG DLAPRYPQAP QDSTLAKSAQ SYWMPGADTS YRQDKPFRWL RPGIVGGKSI MWGRQSYRFS DIDFDANARE GVGVDWPIRY KDIAPWYSYV EKIAGISGEK LGLPQLPDSE FLPPMDMFLV EKEVRKRIEK NFPGRIMTIG RTANLSEARK IQMDSGRASC QYRNQCIRGC PYGGYFSTQS CTLPPAVKTG RLTLRPHSVV TEIMHDAQKQ RATGVRVVDS ETLEHREYFA KVIFVCASAM ASTALLMNSV SDRYPNGMGN DSGQLGHNLM DHHFRIGASG VWEGGEDRYF YGRRANGIYI PRYRNIGTDK RDYLRGFGYQ GGGGRQGWQR SVAELSFGAS LKEELTHPGL WTMGLIGFGE QLPEYRNRMY LDKTQLDKWG MPTVAFDAEI GENERKMRID MLNDAQEMLQ SAGISNVKGY DQGSVVGGAV HEMGTARMGR DPKTSVLNAH NQIHTVKNVF VPDGACMTSS GCVNPSLTYM ALSARAADFA VRELKARRL
|
| |