Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6553 |
Symbol | |
ID | 8730339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7954356 |
End bp | 7955318 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | NAD(P)H quinone oxidoreductase, PIG3 family |
Protein accession | YP_003391309 |
Protein GI | 284041379 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.955062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAA TCATCATCAC CCAGCCCGGC AATAGCTCAG TTCTGGCCTT AGAGGAGCAA GCCACCCCAA CACCAGTATC AGGACAGGTG CTCATTCGCG TACGGGCTGC GGGTGTCAAC CGAAGCGATA TTCACCAGCG AACGGGCGGC TACGGTGCCG ATCCGTCGGG CCAGATTCCG GGTCTGGAGG TAGCCGGTAT TGTAGAAAGC TGTGGTCCCG ACGCCAATCG CTGGCGGGTT GGCGACGCCG TTTGTGCCCT CATCGGCGGG GGCGGTTATG CCGAATACAT AGCCGTCGAC GAACGCCATT GCCTGCCTGT TCCTGCCAAC CTCAGCTTTG TCGAAGCGGC TTCGTTGCCC GAAACGATCC TGACGGTCTG GTCGACGGTT TTCCAATGGG GGCATTTGTC GAAAGGTGAA AATTTTCTTG TGCATGGCGG TAGCAGCGGC ATTGGGGTAA CGGCTATTCA ACTGGCCAAA GCCTTTGGGG CCAATACTTA CGCTACGGCA GGCAGCGACG ACAAATGCGC CTTTTGCGAG CAATTGGGGG CAATTAAGTG TGTCAATTAT AATAAAGAGG ATTTCGAGAA GGCGTTAACT GGCGCAGAAA TCAACATGAT TCTGGATATG GTTGGCGGTG ACTATACCCC AAAAAACCTA CGCCTGCTAG CCCCCGATGG GCGACTCATG TTTATCAACG CCATGCAGGG AGCCGACAGC CAGATCCATA TCCCGACGCT GATGCAGAAG CGGATTACCA TCAGCGGCAG CATGCTCAAG CCCCGCGATG CCAATTTCAA AGCGGCCCTC ACCGCCGAGG TCGAAAAGCA CGTCTGGCCC TTGCTAACGA CCGGTCAATT AAAACCCGTC GTCTATCGCA GTTTCCCCCT GGCAGAAGCC GCCAAAGCGC AGGACCTGAT GGTGAGCAGC GAGCACATCG GCAAGATTAT ACTGGAGCTA TAA
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Protein sequence | MKAIIITQPG NSSVLALEEQ ATPTPVSGQV LIRVRAAGVN RSDIHQRTGG YGADPSGQIP GLEVAGIVES CGPDANRWRV GDAVCALIGG GGYAEYIAVD ERHCLPVPAN LSFVEAASLP ETILTVWSTV FQWGHLSKGE NFLVHGGSSG IGVTAIQLAK AFGANTYATA GSDDKCAFCE QLGAIKCVNY NKEDFEKALT GAEINMILDM VGGDYTPKNL RLLAPDGRLM FINAMQGADS QIHIPTLMQK RITISGSMLK PRDANFKAAL TAEVEKHVWP LLTTGQLKPV VYRSFPLAEA AKAQDLMVSS EHIGKIILEL
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