Gene Slin_6553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6553 
Symbol 
ID8730339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7954356 
End bp7955318 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content56% 
IMG OID 
ProductNAD(P)H quinone oxidoreductase, PIG3 family 
Protein accessionYP_003391309 
Protein GI284041379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.955062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA TCATCATCAC CCAGCCCGGC AATAGCTCAG TTCTGGCCTT AGAGGAGCAA 
GCCACCCCAA CACCAGTATC AGGACAGGTG CTCATTCGCG TACGGGCTGC GGGTGTCAAC
CGAAGCGATA TTCACCAGCG AACGGGCGGC TACGGTGCCG ATCCGTCGGG CCAGATTCCG
GGTCTGGAGG TAGCCGGTAT TGTAGAAAGC TGTGGTCCCG ACGCCAATCG CTGGCGGGTT
GGCGACGCCG TTTGTGCCCT CATCGGCGGG GGCGGTTATG CCGAATACAT AGCCGTCGAC
GAACGCCATT GCCTGCCTGT TCCTGCCAAC CTCAGCTTTG TCGAAGCGGC TTCGTTGCCC
GAAACGATCC TGACGGTCTG GTCGACGGTT TTCCAATGGG GGCATTTGTC GAAAGGTGAA
AATTTTCTTG TGCATGGCGG TAGCAGCGGC ATTGGGGTAA CGGCTATTCA ACTGGCCAAA
GCCTTTGGGG CCAATACTTA CGCTACGGCA GGCAGCGACG ACAAATGCGC CTTTTGCGAG
CAATTGGGGG CAATTAAGTG TGTCAATTAT AATAAAGAGG ATTTCGAGAA GGCGTTAACT
GGCGCAGAAA TCAACATGAT TCTGGATATG GTTGGCGGTG ACTATACCCC AAAAAACCTA
CGCCTGCTAG CCCCCGATGG GCGACTCATG TTTATCAACG CCATGCAGGG AGCCGACAGC
CAGATCCATA TCCCGACGCT GATGCAGAAG CGGATTACCA TCAGCGGCAG CATGCTCAAG
CCCCGCGATG CCAATTTCAA AGCGGCCCTC ACCGCCGAGG TCGAAAAGCA CGTCTGGCCC
TTGCTAACGA CCGGTCAATT AAAACCCGTC GTCTATCGCA GTTTCCCCCT GGCAGAAGCC
GCCAAAGCGC AGGACCTGAT GGTGAGCAGC GAGCACATCG GCAAGATTAT ACTGGAGCTA
TAA
 
Protein sequence
MKAIIITQPG NSSVLALEEQ ATPTPVSGQV LIRVRAAGVN RSDIHQRTGG YGADPSGQIP 
GLEVAGIVES CGPDANRWRV GDAVCALIGG GGYAEYIAVD ERHCLPVPAN LSFVEAASLP
ETILTVWSTV FQWGHLSKGE NFLVHGGSSG IGVTAIQLAK AFGANTYATA GSDDKCAFCE
QLGAIKCVNY NKEDFEKALT GAEINMILDM VGGDYTPKNL RLLAPDGRLM FINAMQGADS
QIHIPTLMQK RITISGSMLK PRDANFKAAL TAEVEKHVWP LLTTGQLKPV VYRSFPLAEA
AKAQDLMVSS EHIGKIILEL