| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6550 |
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| Symbol | |
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| ID | 8730336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7948490 |
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| End bp | 7949791 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003391306 |
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| Protein GI | 284041376 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.125608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTGC GAAAAATAAT CTTATATCTC GGGTGTATGA GTACGTTGTT GACGGCCTCT
GCACAAACGA CGCTAACCCT GCGGCAAACG CTGCAGCAGG TACGCGAAAA CAGTCCGGCC
CTGCGCGTTG AACGGCTAAA CGTCAATGCG GCTCAAGCCG ATCAGGTAAC GGCCAACCTG
CGGCCAAACC CAGTTCTGAA CAATCAGACC CTTTTTCAAC TGGCGCAGCC AGCGGGCACG
TCGGCCCCGC TGCCCGGTGC TGAAGGGGTT GGTGTGCTGA ATCGCCAGCG ACGGCAGTTC
TGGCTTCAGG CCACGAAGGA GTTCGACATT CACAACAAAC GGTTGTACCG AAACCGCTTT
GCCGAAGCCA GTACCAATCT GGCGGTTCAG AGCGTGGCCG AAACCGAACG GGGTATCCTG
TTCGACGCGG CCAACCGGTA CCTCGATGCG TGGTATGCCC GTGTACAACT GGCACTGCTT
CAACGGGCTA AAGCGAACGT CGATACGCTG GTGCAGCTGA ATAAGGTACG GCTTAAAAAT
CTGGTCATTA CAGAAACCGA CCTCACCCGG ACACAACTTA TATCCGATCA GTACGACATC
CAGACGCGCA CCGCCCAGCA GGACGTACGC AACCGCCTGA ACGAACTGCG GCTCGTGGTT
GGTGTAGCCG ATACCATCAA TGTGGCGCTG AACGACTCCA TCATCAATCC CGCTTTTACA
AACCCACTAA GCCTGTACCC GACAGTAACC GCCAGCGCCG ATAGCCTGTT GCGCATTGCC
GCCACGTCCC GTACCGATGT GCGCGTGGCC GAAGCCAATC TGGAAACGGC CCGGCGTAAC
GTCGATCTTC AGCAGGTACT GGCCAAACCC CGTAACGAGG CAGGCTTGAT CTGGAACCCC
CAAAATGCCG TTCCCTACGC GGGTGTTTTC CTGACCCTTG AATTGCCGGT CTATAGCCGC
AATCAGGGCG AAATTCAGAA GTCGCGGGTG TTACAGGAAC AGGCCGGGCA GGCTGCTAAG
TTGATACAGG CACGGATACG GTCGGAGGTA GAAACGGCTT ATCAGTCATT TGCCACCAGT
CGTCAGAACA TCGACCGCTA CGTGGGTATC CGGCGCGATG CCGACCGCGT ACTGGCGTCT
GTCCGCTACG CCTATCTGCG TGGAGCCACG ACCCTGATTG ATCTGCTTCA GGCACAAACG
TCGTGGTTCG ATACCCAAAC CGCCTATTAC CAGGCTCTTT ATACACACCG CCAAAACTAC
GTCCGACTGC TGTACGCAAC CGGGCAAATC AACACGTACT GA
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| Protein sequence | MILRKIILYL GCMSTLLTAS AQTTLTLRQT LQQVRENSPA LRVERLNVNA AQADQVTANL
RPNPVLNNQT LFQLAQPAGT SAPLPGAEGV GVLNRQRRQF WLQATKEFDI HNKRLYRNRF
AEASTNLAVQ SVAETERGIL FDAANRYLDA WYARVQLALL QRAKANVDTL VQLNKVRLKN
LVITETDLTR TQLISDQYDI QTRTAQQDVR NRLNELRLVV GVADTINVAL NDSIINPAFT
NPLSLYPTVT ASADSLLRIA ATSRTDVRVA EANLETARRN VDLQQVLAKP RNEAGLIWNP
QNAVPYAGVF LTLELPVYSR NQGEIQKSRV LQEQAGQAAK LIQARIRSEV ETAYQSFATS
RQNIDRYVGI RRDADRVLAS VRYAYLRGAT TLIDLLQAQT SWFDTQTAYY QALYTHRQNY
VRLLYATGQI NTY
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