| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6548 |
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| Symbol | |
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| ID | 8730334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7945511 |
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| End bp | 7946449 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Ribosylpyrimidine nucleosidase |
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| Protein accession | YP_003391304 |
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| Protein GI | 284041374 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.527968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA TCCCCGTACT TATTGACTGC GACCCCGGCC ACGATGATGC CGTGATGCTA
CTGCTGGCAT TTGGCAGCGG CCTATTCGAC ATCAAAGCGA TTACCAGCTC GGCGGGAAAC
CAAACGCAGG AAAAAACCCT CAAGAACGTG ATGCGGATCA TCGAGTTGAT GGGTGCCGAT
ATTCCAGTCT ACCGGGGAGC TGACAAACCC CTTTTCCGCA AGCTGATCAT CGCCGATAAT
GTTCACGGTG AAATGGGCAT GGATGGTCCT GTATTGCCCG AACCAACCTT GCAGCACCAG
CCACTTTCGG CAATTGAAGC AATAGCGCAG ATTTTGGCCG AAAGTGATGA AAAGATTACG
ATTGTACCAA CCGGCCCGCT CACCAACATT GCTACGTTTC TGCTGGCTTA CCCGCATCTC
AAACCGAAGA TCGAACGTAT TTCGCTGATG GGTGGCGGAG CTTTCCGGGG CAATATTACG
CCCACGGCGG AGTTCAATAT CTTTGTCGAC CCGGAAGCGG CTGCCATCGT GTTCAAATCC
GGCGTTCCGA TTACCATGTG CGGGCTCGAT GTGACGCACA AAGCGCTGGT CTTTCAGGAA
GACATTGACC GATTTAGAGC CATCGGCAAC AAATCGGGCA AGGTGGTGGC TGAGCTGATG
GATTTCTTCT CGATCTATTA CCGGCGCGAA CGGCCGGAAC TGGAAGGCGG GGCCGCCCTG
CACGATCCCT GCGCCATCGC CTGGCTGATC GACCCGTCGA TGTTCACGAC CAAACCCTGC
TATGTGGATG TGGAAGTGGC CGGAACATTA ACGGCGGGGA CCACAGTGGT CGATTTTTTT
GATGTACTGA AGCAAAGCCC GAACGTCGAT TTCGTGTATG ACATCGACCG GAAGAAATAT
ATCCAGCTGA TTTACGACGC CGTGAAGGTG CTGCCGTAA
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| Protein sequence | MKKIPVLIDC DPGHDDAVML LLAFGSGLFD IKAITSSAGN QTQEKTLKNV MRIIELMGAD
IPVYRGADKP LFRKLIIADN VHGEMGMDGP VLPEPTLQHQ PLSAIEAIAQ ILAESDEKIT
IVPTGPLTNI ATFLLAYPHL KPKIERISLM GGGAFRGNIT PTAEFNIFVD PEAAAIVFKS
GVPITMCGLD VTHKALVFQE DIDRFRAIGN KSGKVVAELM DFFSIYYRRE RPELEGGAAL
HDPCAIAWLI DPSMFTTKPC YVDVEVAGTL TAGTTVVDFF DVLKQSPNVD FVYDIDRKKY
IQLIYDAVKV LP
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