| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6530 |
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| Symbol | |
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| ID | 8730316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7925271 |
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| End bp | 7926836 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003391286 |
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| Protein GI | 284041356 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA AGCCACTATA TACCCTGGTT CTGACGGCGA TGTTGTCTTC CTGTTCGAAG
GACTTCATTG ATCGGCCGTC GCTTTCGGGC ACCACAACGG GTAACTATTA TAACAACGCC
GACGAGGTTC GGGCAGCAAC GAGTACACTC TACAGCGGTC TGCCCTGGCG TAACTACGAA
AGCCGGGCGC AGGATGCTAT TGGCGATGTG ATGTCGGGGA ATATGTTCAC CTACACCGAC
GTCGAATACC TGAACTTCAC CGTGTCGTCG GCTTCCGAGC GGATTGGTGC GTCGTGGGGT
GCCTTCTACA AGATCATCGG CTATGCCAAC GTGATGATCA AAACCTTCGA AGAGAAAAAA
GCTGCCGGTG GTGGAGCCGC TTATCTGGAC CCCGCCATTG CCGAGTGTCA TTTCATCCGC
GGGATGCTGT ATTTCTACAT TGCCCGTACG TGGGGAGCCG CTCCGATCAT CACTGATCCG
GGCGCTACGG CCCTGTCGGG TAACTTCAAC ATTCCCCGTT ACATCCAGAA AGACGTACTG
CGGTTTGCCC TTGAAGAGCT GCAATTAGCT GAAACGGGCT TGCCGGAGTC GGACGTGCCG
GGTCGGGTAA CGAAGTATGC CGCGAAGGGG ATGATGGCGA AGTTGTATCT CTACAACAAA
GATTACGCGA ACGCCAAAGC CAAAGCCGAG GAGGTGATCA ACTCGGGCAA ATACAACCTG
GTGACCGATT ACAGCGGCAT GTTCACCAAA ATGAGCATGA ACAACAACGC AGAGTCTATT
TTCTCGATCC AGCACCAACT GGCGCAGGAC CCCTGGGGAA CAGGCAACAT CAAAAACCCC
GACCGGGGAG CCGGTGCCCT GCGGACGTCC GAAGCCGATG CCTGGGAAAT GTATGTGCCA
TCACTGGATT TGTTGAAGGA ATATGAATTT GGTGATCTGC GTCGGCAATG GTCAGTGATG
GAGCACGGCT GGACCAATCC GAACTGGAAG CCGCAGCGTG TGAATGCCCC CAAGTATAAT
GCTTTTATGG CCAATGGCTT CAAATATGAT ACCCTGCAGC CAACCGCCGA TGGGGGTAGC
CTGAGCCCAA CCCGTGCGAA TATCATCAAG TATTTTGCCG GACCCGGCAA AAGCTTCGGC
GGTGATCCCG TGCTGGGACA AAACTCCGGT AACAACGTTG TCTTGCTGCG CTACGCCGAC
ATTCTACTGA TTTATGCCGA AGCTGTACTG GCCGGTGGCA CATCGACCAG CGATGCCAAA
GCACTCGATG CGCTGAACAA AGTACGGAGC CGGGCGGGCC TGTCGCCAAA AACAGCGTTT
ACCCAGAACG ATATTATGCA CGAACGCCGG GTGGAGTTTG CCTTCGAGGG CGACTACTGG
TACGACATTC AGCGCCAGGG CTATGCGAAA GCAAAAGCCA TGATCGAGAA GCAAAATCGG
GGTACCGTAA CGGGAGCTAC GTACATTACC AACTTCACGG AAGATAAAAT GTACCTGCCT
ATCCCATCCG GCGAAATCGT TCAGGACCCC GAGCTTGGTA AAGATCCGGT TCCGTATTAC
AAATAA
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| Protein sequence | MKIKPLYTLV LTAMLSSCSK DFIDRPSLSG TTTGNYYNNA DEVRAATSTL YSGLPWRNYE
SRAQDAIGDV MSGNMFTYTD VEYLNFTVSS ASERIGASWG AFYKIIGYAN VMIKTFEEKK
AAGGGAAYLD PAIAECHFIR GMLYFYIART WGAAPIITDP GATALSGNFN IPRYIQKDVL
RFALEELQLA ETGLPESDVP GRVTKYAAKG MMAKLYLYNK DYANAKAKAE EVINSGKYNL
VTDYSGMFTK MSMNNNAESI FSIQHQLAQD PWGTGNIKNP DRGAGALRTS EADAWEMYVP
SLDLLKEYEF GDLRRQWSVM EHGWTNPNWK PQRVNAPKYN AFMANGFKYD TLQPTADGGS
LSPTRANIIK YFAGPGKSFG GDPVLGQNSG NNVVLLRYAD ILLIYAEAVL AGGTSTSDAK
ALDALNKVRS RAGLSPKTAF TQNDIMHERR VEFAFEGDYW YDIQRQGYAK AKAMIEKQNR
GTVTGATYIT NFTEDKMYLP IPSGEIVQDP ELGKDPVPYY K
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