Gene Slin_6524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6524 
Symbol 
ID8730310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7916866 
End bp7917759 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content53% 
IMG OID 
ProductATP synthase F1, gamma subunit 
Protein accessionYP_003391280 
Protein GI284041350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCAC TAAAAGAAGT ACGCGCCCGG ATTTCGTCGA TTAACTCGAC CCAACAGATA 
ACCAAAGCCA TGAAAATGGT GGCGGCTGCC AAGTTGCGCC GGGCACAGGA TAACATTACG
CAACTGCGGC CTTACGCTCA GAAATTGAGC CAGATGCTCG GAACCGTTTC TGCCGGTGCA
GAAACCGCGT CGGAGAATCC ATACAAGCAG ACACGGGCCA TTGGCCGCGT TCTGTTGATT
GTGGTTACCT CAGACCGGGG GCTGTGCGGT GCTTTCAACA CAAACGTGGT GAAAGCGGCT
CTGACGCTGA TTGATGAGAA ATATTCGGCT CAGGCTCGTT CCGGCAACGT TGAGATCATG
GCCATTGGTA AGAAAGGTGC TGAAGCGTTT CAGCGTCGGG GCTTTAAGGT CAATACGTCG
CACGTCGATG CGTTTGGCTC GTTAAGCTTT GCTACCGTGC GTACGGCCGC CGAAGAAGCG
ATGGAAGGTT TTGCCAACGG TCGCTATGAT CTTGTTGAGG TAATCTACAA CGAGTTCAAG
AATGCTGCCA TGCAGATTGT TCGGACGGAG CAGATGTTGC CCATCGTTTC GGCCGACAAG
CCGGGTTCGG GCGTTGCAGC GGCTTCTGTC AACTACATCT TTGAACCATC GGAGGTAGAG
ATCATTACTG AGCTGATCCC GAAAACAATT AAAATTCAGC TGTACAAAGC GGTATTGGAT
TCGAATGCAT CAGAACACGG TGCCCGGATG ACCGCCATGG ATAAAGCAAC TGAAAATGCT
GGTGAGTTGC TGAAAGAACT GCGTCTGGTT TACAACCGGA CTCGTCAGGC GGCCATTACG
ACCGAGATTC TCGAAATCGT GGGTGGTGCC GAAGCACTGG CCAGCGCTTC CTAA
 
Protein sequence
MASLKEVRAR ISSINSTQQI TKAMKMVAAA KLRRAQDNIT QLRPYAQKLS QMLGTVSAGA 
ETASENPYKQ TRAIGRVLLI VVTSDRGLCG AFNTNVVKAA LTLIDEKYSA QARSGNVEIM
AIGKKGAEAF QRRGFKVNTS HVDAFGSLSF ATVRTAAEEA MEGFANGRYD LVEVIYNEFK
NAAMQIVRTE QMLPIVSADK PGSGVAAASV NYIFEPSEVE IITELIPKTI KIQLYKAVLD
SNASEHGARM TAMDKATENA GELLKELRLV YNRTRQAAIT TEILEIVGGA EALASAS