Gene Slin_6522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6522 
Symbol 
ID8730308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7914031 
End bp7914807 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID 
ProductPeptidylprolyl isomerase 
Protein accessionYP_003391278 
Protein GI284041348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTA ATCAATGGAT GCTGGCCGGT ATTGCGTCAG CCGTTTTTGT TGCCGGTTCC 
GCAACAGCTC AGGTAAAAAA GTCAACGGTA AAAAAACCGG CTGCCCCTGC CAAATCAGCC
ACCGCAGCCA GACCTGCTAC AACCGGTGCG ACCATAGCCT CTACTCAGGA TTCTGTTAGT
TATAGCATTG GGGTATTCAT GGCACAGAGC CTGAAACAGC AGGGAATTAC TGATCTTGAT
GCTGCCCTGT TGACGCGTGG CCTTCAGGAC GCGATCAGCG GTCAGCCAAC CCGTCTGACG
CTGGAGCAAT GCAATCAGGT AATGATGGCC TACCAGCAAA AGCAAATGAC TGTCCGGAAT
GCGGAAGGCA TGAAAGCCTC GGCCGAAAAT AAAAAGATCG GCGCTGCCTT TTTAACGGAG
AACAAAGCAA AGGCGGGGGT AGTTACTACC GCTAGCGGTC TACAGTACTC AATTGAAAAA
GAAGGAACTG GCGCTAAGCC AACCGTCAAA GATCGGGTTA AGGTCCACTA CACCGGCCGC
CTGCTGGACG GCAAAGTGTT CGACAGCTCG GTAGAACGGG GAGAGGCAAT TGAATTTGGC
GTAACCGAAG TAATTAAAGG CTGGACGGAA GCTCTACAGT TGATGCCGGT AGGCTCAAAG
TGGAAACTCT ACATTCCGTC TGATTTGGCC TATGGAGACC GTGGTGCCGG TGCTGATATC
AAACCCGGCT CAACATTAGT CTTCGACGTA GAGTTGCTTG ATATAGTTAA ACAATAA
 
Protein sequence
MKFNQWMLAG IASAVFVAGS ATAQVKKSTV KKPAAPAKSA TAARPATTGA TIASTQDSVS 
YSIGVFMAQS LKQQGITDLD AALLTRGLQD AISGQPTRLT LEQCNQVMMA YQQKQMTVRN
AEGMKASAEN KKIGAAFLTE NKAKAGVVTT ASGLQYSIEK EGTGAKPTVK DRVKVHYTGR
LLDGKVFDSS VERGEAIEFG VTEVIKGWTE ALQLMPVGSK WKLYIPSDLA YGDRGAGADI
KPGSTLVFDV ELLDIVKQ