Gene Slin_6517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6517 
Symbol 
ID8730303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7907642 
End bp7908949 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content54% 
IMG OID 
ProductUDP-N-acetylglucosamine1- carboxyvinyltransferase 
Protein accessionYP_003391273 
Protein GI284041343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0837783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTT TTCAAATCAC AGGCGGACGT AAACTAAAAG GCGAACTGAA TCCGCAGGGC 
GCAAAAAACG AAGCGCTGCA AATTCTTTGC GCCGTATTGC TGACCAAAGA ACCCATTACG
ATTCACAACA TTCCCGGTAT TCGGGATGTG AATCAACTCA TCGACCTACT GGGCGATCTG
GGCGTATGGG TTACGAAGAT TGGCGAAAGT TCGTACCGGT TTCAGGCCAG CGATGTTAAT
CTGGACTACC TCGAAACAGA CACCTACAAG CGTAAAGCAG CCGCTTTACG GGGATCGGTC
ATGTTACTGG GTCCTATGCT GGCCCGGTTT AAAAAAGGAC GGATTCCCCG GCCCGGTGGC
GACAAAATCG GCCGTCGCCG GTTGGATACC CACTTCCTGG GCTTCGAAAA GCTCGGTGCT
CAGTTTAACT ACGATGCCAA CGACGGCGGC TACTACCAGG TAGATGCCAG CAACCTGCGC
GGCACCTATA TGCTGCTCGA CGAGGCCTCC GTAACCGGTA CGGCCAATGT ACTGATGGCC
GCCGTTATGG CCGAGGGCAC AACGCAGATT TACAATGCAG CCTGTGAGCC CTACCTACAG
CAGCTGAGCA AAATGCTTAA CTCCATGGGT GCCAAAATTA CAGGTGTTGG CTCTAACCTG
CTCACCATTG AGGGGGTATC GGAGCTGCAC GGTACGGAGC ACACCATGCT ACCCGACATG
ATCGAGATTG GCTCGTTTAT CGGGCTGGCT GCCATGACGC AGTCGGAAAT AACGATTAAA
AACTGCCGGA TTCCCGAATT AGGCATTATT CCCGATCAGT TCAGGCGGTT AGGTATCCAG
ATGGAATTCC GGGGCGACGA TATTTTTATT CCGGCTCAGG AGCGCTACCA GATCGAAAGC
TTCCTGGATG GCGGCATGAT GACCGTTTCT GATTCTCCCT GGCCGGGCTT CACCCCCGAT
CTGCTGAGCA TTGTTCTCGT CACCGCCGTA CAGGCGCAGG GAACTCTGCT GATTCACCAG
AAAATGTTCG AAAGTCGGCT GTTCTTTGTG GATAAACTCA TCGACATGGG TGCTCAGATT
ATCCTGTGCG ATCCACACCG TGCTACGGTT GTTGGCCTGA ACCGCCAGAT TCCGCTGAAA
GGCATCCGCA TGTCATCGCC GGATATCCGG GCGGGGGTTG CCCTGCTGAT CGCGGCCATG
TCGGCGCAGG GTACCAGCAT CATTGATAAC ATTGAACAGA TCGACCGGGG TTATCAGAAC
ATCGATACCC GCCTGAATGC CATTGGTGCC GAGATCATTC GATTGTAA
 
Protein sequence
MASFQITGGR KLKGELNPQG AKNEALQILC AVLLTKEPIT IHNIPGIRDV NQLIDLLGDL 
GVWVTKIGES SYRFQASDVN LDYLETDTYK RKAAALRGSV MLLGPMLARF KKGRIPRPGG
DKIGRRRLDT HFLGFEKLGA QFNYDANDGG YYQVDASNLR GTYMLLDEAS VTGTANVLMA
AVMAEGTTQI YNAACEPYLQ QLSKMLNSMG AKITGVGSNL LTIEGVSELH GTEHTMLPDM
IEIGSFIGLA AMTQSEITIK NCRIPELGII PDQFRRLGIQ MEFRGDDIFI PAQERYQIES
FLDGGMMTVS DSPWPGFTPD LLSIVLVTAV QAQGTLLIHQ KMFESRLFFV DKLIDMGAQI
ILCDPHRATV VGLNRQIPLK GIRMSSPDIR AGVALLIAAM SAQGTSIIDN IEQIDRGYQN
IDTRLNAIGA EIIRL