Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6514 |
Symbol | |
ID | 8730300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7905064 |
End bp | 7905960 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF62 |
Protein accession | YP_003391270 |
Protein GI | 284041340 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0914028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACTTA TTTACGGCTT AATTTGCTTG TTCATTCTTT CGCTGCTCCC ATTGGCAAAG GGGCAAAATG GCATCGTTGT TTTTCAGTCT GATTTTGGGT TGAAAGATGG AGCCGTATCG GCCATGAAAG GCGTGGCACT GGGTGTATCA TCAACCCTTA AGCTGGAAGA CCTAACCCAT GAAATCCCGG CGTATAACAT CTGGGAAGCG GCCTATCGTC TACACCAAAC CGTCCCCTAC TACCCCAAAG GCACCGTTTT CGTGTCCGTT TGCGACCCTG GTGTGGGTAC AGAACGACGG TCGGTAGTAA TGCTCACCAA ATCGGGGCAC TACATTGTTA CACCCGATAA CGGCACGCTT ACCCTGCTGG CCGAACACCT TGGCATTGCC GAAATCCGAC AAATTGACGA AGCCATTAAC CGGCTGAAAA ACTCGGGAGC ATCTTATACC TTTCATGGGC GCGATGTGTA TGCGTATACA GCTGCCCGGT TAGCCGCAAA GGTCATCACA TTTCAGCAGG TGGGTCCGAA GCTACCCGCC GAAGTCGTTA AGCTGGATTA CCAGAAAGCG GAGTATGCCA ACGGCACGGT GAAGGGCAAT ATTCCCGTAC TCGACGTTCA GTACGGCAAC GTCTGGAGTA ACATTCCCCG CGCTATGATC GACCAGCTCG GCGTAAAACC GGGCGCATCG GTGCGGGTAC AGATCTTCCA TGGCGAAACA AGCCTCTACG ATAAAACCGT TCGGATGGTC AATACGTTTG GTGAAGCACC GGTTGGCAAT GATGTAGCTT ACATAAACAG CTTGCTGAAC TTCTCCATAG CCGTGAATCA GGGCAATTTT TCGGAGACGT ATAAGGTGTT CAGCGGCCCG GATTGGAGGA TCGTAGTGAG CCGGTAA
|
Protein sequence | MRLIYGLICL FILSLLPLAK GQNGIVVFQS DFGLKDGAVS AMKGVALGVS STLKLEDLTH EIPAYNIWEA AYRLHQTVPY YPKGTVFVSV CDPGVGTERR SVVMLTKSGH YIVTPDNGTL TLLAEHLGIA EIRQIDEAIN RLKNSGASYT FHGRDVYAYT AARLAAKVIT FQQVGPKLPA EVVKLDYQKA EYANGTVKGN IPVLDVQYGN VWSNIPRAMI DQLGVKPGAS VRVQIFHGET SLYDKTVRMV NTFGEAPVGN DVAYINSLLN FSIAVNQGNF SETYKVFSGP DWRIVVSR
|
| |