| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6506 |
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| Symbol | |
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| ID | 8730292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7897456 |
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| End bp | 7898475 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003391262 |
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| Protein GI | 284041332 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAC AAAATGACTT GTTGCTCCGC ACCGCGCGGG GTGAATTGAC CGAGCGGGTG
CCGGTCTGGA TGATGCGGCA GGCGGGGCGG GTCTTACCGC AATACCGGGC TGTTCGGGAG
CGAGCCGGGA GCTTCATCAC GCTGGCTAAA ACCCCAGAGC TGGCCGCTGA AGTGACGATC
CAACCGGTCG ACGCCTTCGA TGTGGATGCG GCTATCATCT TCTCGGATAT CCTTGTCGTA
CCCGAAGCGA TGGGCCTCCC CTACGAAATG ATTGAAAGCC GGGGACCCGT TTTCCCGACC
ACCGTTCGGA ATCAGGCCGA TCTGAGTCAC CTGCGCGTGG CCGATGCCGA AAGCGACCTG
GGCTACGTGC TGGATGCCAT CAAACTAACC AAAAAAGAGC TGAACAACCG GGTGCCGCTC
ATTGGTTTTG CCGGAGCCCC GTTCACTATT TTCTGCTACA TGACTGAAGG CAAAGGTTCG
AAAACCTTCT CTGTAGCCAA GAAACTGCTT TATACTGATC CCAACTTTGC CCATGCCTTA
CTTCAGCAAA TTACGGACAG TACGATAGCG TATTTACAGG CGCAGATTCG GGCAGGTGTC
GATCTGGTAC AGATTTTCGA TTCATGGGCG GGTATCCTCT CGCCGGAGCA GTACCGGACT
TTCTCGCTGC CTTACATCAA GCAAATCTGC GATGTAATTT CTGAGGTACC CGTAACCGTT
TTTGCAAAAG GGGCTTTCTT TGCCCGACAT GAAATTGGTC AGTTGAGCTG CGATGTGGTA
GGATTGGACT GGAACATGGA CCCCAAAGAA TCGCGGGCGC TGGTGCCCGA CCGGGTATTG
CAGGGAAACT TAGACCCCTG TGTTTTGTAC GCTGACTTTG CCCAGATTCG GGCGGAAGCG
AAACAGATGC TCAGCGACTT TGGCCATCAG CATTATATTG CCAACCTCGG CCACGGCATC
TACCCCGATA CAGATCCAGA CAAGGCCCGG TGTTTTGTCG ACGCTGTGAA GGAAATGTAA
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| Protein sequence | MTLQNDLLLR TARGELTERV PVWMMRQAGR VLPQYRAVRE RAGSFITLAK TPELAAEVTI
QPVDAFDVDA AIIFSDILVV PEAMGLPYEM IESRGPVFPT TVRNQADLSH LRVADAESDL
GYVLDAIKLT KKELNNRVPL IGFAGAPFTI FCYMTEGKGS KTFSVAKKLL YTDPNFAHAL
LQQITDSTIA YLQAQIRAGV DLVQIFDSWA GILSPEQYRT FSLPYIKQIC DVISEVPVTV
FAKGAFFARH EIGQLSCDVV GLDWNMDPKE SRALVPDRVL QGNLDPCVLY ADFAQIRAEA
KQMLSDFGHQ HYIANLGHGI YPDTDPDKAR CFVDAVKEM
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