Gene Slin_6505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6505 
Symbol 
ID8730291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7896315 
End bp7897316 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content52% 
IMG OID 
ProductPfkB domain protein 
Protein accessionYP_003391261 
Protein GI284041331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGG TTGGTGTCTT GGATATGTCT ATTGACGAGC TGTTCGATCA GTTCGATAAA 
CTTCGCGTGT TGATTGTTGG CGATGTGATG CTCGACTCCT ACGTATGGGG CCGCGTTGAG
CGGATTTCGC CCGAAGCACC GGTTCCCGTA GTAACGGTCG ACCGGCGCGA GTTACGTCTG
GGGGGAGCCG GAAACGTACT GCTGAACGTA CAGGCGCTGG GAGCCGAAGC TATTATCTGC
TCCATCATTG GTACCGATGC ACCGGGCGAC CAACTCGAAC AGGAACTCTG CAACCGGGGC
CTCAACTGCG ACGGGCTCAT TCGAAGTGCA GACCGGATCA CGACTATTAA AGAACGCATC
ATTGCCGGAT CGCAACAGGT GGTTCGGGTA GATACGGAAA CGGATAAATA CATCACGACC
GACGAGCGGA CGCGGTTAAT TGCCAAAGCG AAAGAACTGA TCCCAACCTG CCATGTCGTT
ATTTTTGAAG ATTACGATAA AGGGGTGCTC AGCAAAGAAG CCATTGCCGA AATAACGGAT
TTTGCCAATG AGCAGGGCGT TCCAACGGTT GTTGACCCCA AGAAACGAAA CTTCCTGTCG
TACCAGAATA CAACGTTATT CAAACCGAAT CTCAAAGAAC TGCGGGAGGG GTTGAAAGTC
GATTTTGACG TCGACAAACC GGAGGAGTTT CAGGCTGTTG TCAGGCAGTT GAAGGAAACT
CTGAACCTGA AAGGTGCCCT GATTACGCTC TCGGAGCGGG GTGCTTATAT CGACTACAAA
GAGGAGCGGT TGAAACTACC GGCTCACATC CGCAAAATTG CCGATGTTTC CGGCGCGGGC
GATACCGTTA TCAGTATTGC GGCCTGCTGT GTAGCTCTCC AGCAACCCCC TCACATCATT
GCGGGGTTGT CGAATTTGGG CGGTGGCCTG GTTTGTGAGT CAGTTGGCGT GGTGCCAATT
GATAAGGCAC TGCTGAAGCA GGAAGCGAAA GAGAGCTTAT AA
 
Protein sequence
MSPVGVLDMS IDELFDQFDK LRVLIVGDVM LDSYVWGRVE RISPEAPVPV VTVDRRELRL 
GGAGNVLLNV QALGAEAIIC SIIGTDAPGD QLEQELCNRG LNCDGLIRSA DRITTIKERI
IAGSQQVVRV DTETDKYITT DERTRLIAKA KELIPTCHVV IFEDYDKGVL SKEAIAEITD
FANEQGVPTV VDPKKRNFLS YQNTTLFKPN LKELREGLKV DFDVDKPEEF QAVVRQLKET
LNLKGALITL SERGAYIDYK EERLKLPAHI RKIADVSGAG DTVISIAACC VALQQPPHII
AGLSNLGGGL VCESVGVVPI DKALLKQEAK ESL