Gene Slin_6499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6499 
Symbol 
ID8730285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7884325 
End bp7885017 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003391255 
Protein GI284041325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC TTCGCGTCGA AAATCTGACG AAAACCTATT CGAGTGGGGG TCAGGATTTA 
ACCGTTCTGC ACGGTGTCAA CTTCACCCTC GAACCCGGCG ATACCTTCTC CATCGTTGGC
CCATCGGGCA GCGGCAAAAC AACCCTGCTG GGCTTGTGTG CGGGTCTGGA CCGGTCTTCG
TCGGGTAGCG TTTATCTTAA TGATGTTCGG CTGGATACGC TCAATGAAGA CCAGCGGGCG
GCTATTCGCA ATCAGTACGT TGGCTTTATT TTCCAGAATT TTCAGTTACT ACCGACCCTC
ACCGCGCTCG AAAACGTGAT GGTGCCGCTC GAACTTCGTG GTGAGAAGGG AGCGGCCAGA
GCTGCTCAGG CTCTGCTGGA ACGCGTTGGT CTGGGCAAAC GCGGGCACCA CTACCCTACT
CAATTGTCGG GTGGTGAGCA GCAACGCGTA TCGCTGGCCC GTGCCTTTGC CAACCGGCCC
AAACTGCTTT TTGCCGATGA GCCAACCGGC AACCTCGACG CCGACACCAG CGCCACTGTT
GTCGACCTAC TTTTTGAACT CAACCGCGAA GCCGGAACAA CCCTCGTTCT GGTCACGCAC
GACATGGAAC TGGCTGCCCG CACCCAGCGG GTTATCCGAA TTAAAGGTGG AACGGTCGTC
GATCAATTTG TGAATGATAG AATGATTCAA TGA
 
Protein sequence
MSILRVENLT KTYSSGGQDL TVLHGVNFTL EPGDTFSIVG PSGSGKTTLL GLCAGLDRSS 
SGSVYLNDVR LDTLNEDQRA AIRNQYVGFI FQNFQLLPTL TALENVMVPL ELRGEKGAAR
AAQALLERVG LGKRGHHYPT QLSGGEQQRV SLARAFANRP KLLFADEPTG NLDADTSATV
VDLLFELNRE AGTTLVLVTH DMELAARTQR VIRIKGGTVV DQFVNDRMIQ