| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6471 |
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| Symbol | |
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| ID | 8730256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7843808 |
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| End bp | 7847632 |
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| Gene Length | 3825 bp |
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| Protein Length | 1274 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_003391227 |
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| Protein GI | 284041297 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.707662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG ATTTGTTTAA ACCTAATGAT GCCATGGTTA ACCAAAAATT GATTCAATCC
ATATCTCTAT GGCTATTCTG TTGGCTGATA GCTGGCTTTG TTTATGCACA ACCGATGACG
GAACGGGGCA TGAAAGGCTT GACTACAGGC GATGGAGCTG CCTCATTTAA TCATGTCTGG
GCATTGTCGG TAGGCGTGTC GAAATACGCA GCTTCCAGCT ATAGTACATT AAACTTTGCG
GATGATGACG CGATTTGGTT CGACAAATTT ATTCGGCGGG CCTATGGCCA GAAAGCCGTA
AAAAAAGATG CGTTTCAACT GCTGACAAAC GAAAACGCCA CGGCACCAAA TTTCAATAAA
TGGCTTTCTG GGCTTAAAGA AGCCCAGAAG GGTGATCTGG TCGTTTTATA TTTTGCAGGG
CACGGTTTTC TTAAATCGAT TGAAAATAAG CCTCATTGCT ACCTTTTGTT CCATAAAACT
GAAGAAGGGA ATGAAGGGGC GCCCGGCGAC GACAACTGTT ACCTGAGCCA GCTTTTAGAA
ACAACATTGA CTGAACTGGC TGCCAGAGGA GTGAAGGTTT TATGTATTCT GGATGCCTGC
CACTCAGGAA CAGCTCAGAT CAGTACGCCT GTAAGTGCCA TTACCGGGCA GAATTTTCTA
ACCCTACTCG CTTGTGGCAA AGATCAGACT TCGATTGAAG ATAAATCCTT CGGGGGAGGA
CATGGAGCCT TTACGTGGTT TGTTGTCCGT GGACTAGCTG GCGAAGCTGA TAGCGATCAA
AATGGTATTG TGCAGTTAGA GGAACTGGAA ATTTATGTGA AATCGAAGCT TTTGGAAACC
GGACGCGTAT TTAAACATGA CCAGAATCCT CTGTTTCCGA ATGGCTCGTC CTTTGCTTTC
GCAGCCAATC TGGCTCTTTT TCAGGAATTT CGGCAAGGGT CGATTGCTCC AAACGCTGAG
CAAACAGCTG GTCTAACCGC CGAACAGCAG CAAATCTATA AGAACTTACA GGCGGCCTTA
CAGGCTAAAC AGCTTGTCAA ACCCGCAGGG CGGAGTGTTC GGGATTATTT TGCGGTTCTA
GCAAGAGATG CTACGAACAA AGATTTACTA GCACCGATTG CCCGCGAATG GATGGTTGCT
TTCGAAATCC CGGCTCAAAC ACTAATTGAT CGGTACTACG ACGGTAAATT AGAGAACTCA
GAGCGGTATG CAGAAGCGGC CGGATTACTG GCAGAGTCGC TTAAATATCC ACAATTTATT
GCCGCAAACC GGCTGAACGA ACTCACAGCC CGGCAGGCCT TTCTACGGGC TTATGCCTTC
TTCTGCCAAT ACCTGGAAAA TAAACAGACG TTGGATGAAT CGGAGCGAAA TAACCGATTC
AGAGGGTTAA TAAGTGATTT GGAGTCAGCT GCTGGCTTAT CGCAGGCACC CGCGTACATC
TATAATGTAA TCGGTTTGTT CTGGCACGAA CTCAATGATA AAGAGAAGGC CGAACAGTAT
TATCACAGGG CCCGGGAACT GGCGCCTACC TGGGCTATTC CCATTAATAA CTTAGCGGGC
CTGATCGAAG ATTCCCGACA GCGAATCAAT CAATATGAGC AGGCGAAAGG GTTTTATGTA
GCCTTAATGA ACATTGTTAG AGAGTACAAA ACCCTAAAAG AGTACGACAA AGCCAGGGAG
TATCTGCAAA AGGCCTTAAA GAGTGCCGCC AATGATTCAG CAAAAGTGGC CGATATCTAT
AAGCAGTATG GCTTAATTTA TCAGGAAGAG GGAGAAAGCA ATTCGGCTAA TTATGATAAA
GCCATTGAGT CGTATCAGAA AGCGGCTCAA TGGGCTCGCT CGAATCGGTC CATCCGACAA
GGGCTCGATC TGGAACTAAC CCGCCTGTAC CTACAAATGA AGGCCTATGA CAAAGCCGCA
GAGACGTTTG ATCGTTACAT TGAACAGGAA GAACAGATTG TGACTCGCCA GTACAATGAG
CTGTATCGCC ATTACCGATC CCTACTAACT GAACAACGCG GGGAGTATTT TTATCGGATA
GGTTATTGTT ACGAAAAAGG GTATGGCGTC GCCCGGAGTG ATGCGGAAGC CCGGCGCTGG
TATCAGTTTG CCGCTAATAT GAATTTTAAC ATGGCTGTAG CTAAATTAAC CCATCTTTAT
ACAGCGGTAG GTGCAAATGA TGCCTTGAAA CGTCTGAGAA AAAATCAGGA AAAAGGATAC
TTGAGTTGCA CTGCATCTTG CCGAAAAACC GATGGCACTT TAGCTACATT TACGGTTTAC
CTGCATGATT TTGTGGCTAA TTCGAAAAAT CCGGTGAGCG AGGAGCAGGA TAGGATTCAG
CAGGCTTTCG GAGCTAAAAT ATCTGAGGAC GCACTCAGTG CTTTCCTGAA AGTCTATGAG
TTAGCACAGA AACATAATGT TTCATTTCAG GATTTAATGA AGTTCGTAAT TAATGAAAAT
GAAAAGAGTC AGGTAAAAGT TGCTGAAGGT AAAGCCTTCG AATTTGCGAA AGCAGAGCAG
CCGGACAGTG TGATGCGGTA CATGAGAAAG GCGGTTTTAG GCCTGGACAT CGACCTTTCC
AGTGAGGTTA AATCGTCGCA AAAATTACTT GATTCATTAC GGGCAGGAAC CAGCCGGCCA
GGGCTGTTTT ATTATGCGCT GGGATACCTT TATGAAAACA AAACCAGCGG TCGGGAATGG
GGTGGGAAAG CCGAAAAATG GTATAACTAT GCCTTTCAGA CAGGTTATGC CCCCGCTTAT
TTTCCGCTGA TGAAGCATTA TAAGGCCCTG TCTATGACGT CGTTTACTAC TTGGCTTACC
GATAACTATA ACAGGGGAGT AGAAGCCAAA CAGGTCAAAT GCACACTCGA AAACGGTAAG
GAGCAATGGT ATCCGCTGTA TCTGGTAGAC TTCCCGGCTA ATCCATCTAA TCCGATTGCC
GACGAAGCTA GTCGATTGAA AGACGTATAT GGAGCTAAGG TAGCAACCAA GCTAGCCAGT
GCCTTCAAAA CCATTTATGA GACAGCCCAG CGCGAAAGGC GTTCGTTTAT CGAGCAGTGT
CGGCTTAGCC TGAATATAAC ACCTGAGCGG GAGAAGAAGG CCAGCTCAGC TGCCGAGCAG
CATGCCCGTC GGGGAGATGA GTTATATGAA GAGCGGAAAT ATGCCGATGC GGTTGGCCCG
TACCAACAAG CTGTGAATGC AGCTACCAGC CCTGCCGACC GGGCCATCTA TTACTCCCGG
CTAGGCAACG CTTATCTAAT GAGCAATCAG GAAGATAAGG CCCTCAATAG TTATCGAACC
AGTATTGCCC TATCCCCAAC GGGACAGGCT TACTACAACA TGGGTTATGT GCTCGAATAC
TTGCGGAAAC AAAAGGATGC TATTGCTGCC TACCGTAAAG CTGTAGAGCT GGAGTCAACA
GTTGCCTTGT ACCACCGAGG TTTGGCGAGT GCGTATTCCA GCGCTGGGCA ATATGAACTG
GCTGCTCAGA GTGCCAGAGC GACACTGGCT ATCGAGCCAA CAGACACGCG GGCGATGAAC
ACACTTGGCA TATCATTAAC CTATCTTAAA CGCTATGACG AAGCACTAAA ACAATTTGCC
AGGGCTATCG AACTTAACCC GTCGCAGGAG AGCACGTATC TGTATAACAT TGCTTGTAAT
TATTCACTGC AAAATCGACA GGCTGATGCA TTGTTGTACT TAGAAAAAGC GATCAATCGG
GGGTATAAAG ATCATGAGGC TATTATGAAA GATCTGGACT TTACGAGTAT CCGGCAGAGC
GACGGATTTA GACGGCTGAT GGCACGCTAT TTCCCTGGAA AATAA
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| Protein sequence | MSFDLFKPND AMVNQKLIQS ISLWLFCWLI AGFVYAQPMT ERGMKGLTTG DGAASFNHVW
ALSVGVSKYA ASSYSTLNFA DDDAIWFDKF IRRAYGQKAV KKDAFQLLTN ENATAPNFNK
WLSGLKEAQK GDLVVLYFAG HGFLKSIENK PHCYLLFHKT EEGNEGAPGD DNCYLSQLLE
TTLTELAARG VKVLCILDAC HSGTAQISTP VSAITGQNFL TLLACGKDQT SIEDKSFGGG
HGAFTWFVVR GLAGEADSDQ NGIVQLEELE IYVKSKLLET GRVFKHDQNP LFPNGSSFAF
AANLALFQEF RQGSIAPNAE QTAGLTAEQQ QIYKNLQAAL QAKQLVKPAG RSVRDYFAVL
ARDATNKDLL APIAREWMVA FEIPAQTLID RYYDGKLENS ERYAEAAGLL AESLKYPQFI
AANRLNELTA RQAFLRAYAF FCQYLENKQT LDESERNNRF RGLISDLESA AGLSQAPAYI
YNVIGLFWHE LNDKEKAEQY YHRARELAPT WAIPINNLAG LIEDSRQRIN QYEQAKGFYV
ALMNIVREYK TLKEYDKARE YLQKALKSAA NDSAKVADIY KQYGLIYQEE GESNSANYDK
AIESYQKAAQ WARSNRSIRQ GLDLELTRLY LQMKAYDKAA ETFDRYIEQE EQIVTRQYNE
LYRHYRSLLT EQRGEYFYRI GYCYEKGYGV ARSDAEARRW YQFAANMNFN MAVAKLTHLY
TAVGANDALK RLRKNQEKGY LSCTASCRKT DGTLATFTVY LHDFVANSKN PVSEEQDRIQ
QAFGAKISED ALSAFLKVYE LAQKHNVSFQ DLMKFVINEN EKSQVKVAEG KAFEFAKAEQ
PDSVMRYMRK AVLGLDIDLS SEVKSSQKLL DSLRAGTSRP GLFYYALGYL YENKTSGREW
GGKAEKWYNY AFQTGYAPAY FPLMKHYKAL SMTSFTTWLT DNYNRGVEAK QVKCTLENGK
EQWYPLYLVD FPANPSNPIA DEASRLKDVY GAKVATKLAS AFKTIYETAQ RERRSFIEQC
RLSLNITPER EKKASSAAEQ HARRGDELYE ERKYADAVGP YQQAVNAATS PADRAIYYSR
LGNAYLMSNQ EDKALNSYRT SIALSPTGQA YYNMGYVLEY LRKQKDAIAA YRKAVELEST
VALYHRGLAS AYSSAGQYEL AAQSARATLA IEPTDTRAMN TLGISLTYLK RYDEALKQFA
RAIELNPSQE STYLYNIACN YSLQNRQADA LLYLEKAINR GYKDHEAIMK DLDFTSIRQS
DGFRRLMARY FPGK
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