| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6450 |
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| Symbol | |
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| ID | 8730234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7819743 |
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| End bp | 7821224 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003391206 |
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| Protein GI | 284041276 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.960528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA GATATCTAAC TATACTAGTA GCGCTGGGCC TGCTGACAAC AGCCTGCGAA
AAAGACTATC TGGAAACGGC ACCCACCGCC AGTATCGATG CCGGGGCGGC CTATTCCACC
ACGAAAAATG CCGCCAGCGC CATCAACGGT ATTTACCGGG CCATGGTTGT CCGGTACCTG
GGCTCGCAGG GGCACTTTGG TCATCCGGCC ATGATGATCA TCATCGACGC ACTGGGTGAA
GATCTGCTTC TGAGCAATAC CTCAAATAAC TGGCACCTTG CCGAACAGCG CTGGCAGGCT
CACCGCTCGG AAACATCGGT CGGCGATCAA CTGCCTTATG AGTTGTATTA TCGGGTAATC
GGTAATGCGA ACATCGGTAT TGCCAGTATC GACAATGCCG CAGGCACTCA GCCGGAGCGT
AATCAGGTTA AAGGAGAAGC GCTGGCGTTA CGGGCATTCT CGTATTTCAA TCTGGTACAA
CTTTACGGGA AGCGGTACGA TGCTGCGGCC AAACCCAATA GCCAACTGGG CGTACCGCTG
GTGCTGACGC CCACCACTGA AGGACTGCCA CGGGCCACCG TTGAAGAAGT ATATACGCAG
GTAAACAAGG ATCTTGCCGA TGCGGCTACG CTGCTTACCT CAACCCGTTC GTTCAAATCG
CACATCAATC TGGAGGTGAT CAAAGGCTTG CAGGCGCGGG TAGCCCTGAC GCAGCAGAAC
TGGGCCGATG CCGCAAAATT TGCCGCCGAA GCCCGCAAAG GCTTCTCGCT GATGAGTATT
GCCCAGTATC AGGAAGGCTT CTCAGACATA GGTAATCCGG AGTGGATGTG GGGGTTCGAT
CACGTCGAAG ATCAGTCGGA GTTTTTTGGT GCGTTTCACT CCTACATGTC CAGCAACTAT
AATTCTACCA ACATCCGGGT AACGCCGAAG GCCATCAACA GCCTGTTGTA CGACCAGATT
CCGGCTACGG ACGTGCGGTC GAAGATGTGG GTTAAAGCGC CAACGACGGC TAATTCAATT
GTGCCAACGG GTGGTGTACG AGTTCCCTAT ATGAACCAGA AGTTCCGGCT ACCGGGTACG
CCCTCCACCA GTGCCATGGG CGATATTCCG TACATGCGGG TGGCGGAAAT GTATCTGATC
GAAGCCGAAG CGCAGGCACG GCTGGGCAAT GCTACGGCAG CCGCCAGCAC CTTGTTCGAC
CTGGTCAGCA AGCGCGATCC ATCGTATAAG TTATCGACCA GTACGGGTGC CGCGCTGCTT
AACGAGATTC TGTTCCAGCG TCGTATTGAA CTGTGGGGCG AAGGCTTCCG GTTCACGGAT
CTGAAGCGCA TGAACATGGC CCTCAACCGG AACGGCACGA CCAATACCAA TTCGGCCGTA
GTCGTGCTAT TCGACGTAGC TCCCGGCGAT GTTCAGTGGG AGTTCCTGAT TCCCCGCCGG
GAATTGAACG CCAATAAGGC GGTCGTGCAA AACCCGCTAT AA
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| Protein sequence | MKARYLTILV ALGLLTTACE KDYLETAPTA SIDAGAAYST TKNAASAING IYRAMVVRYL
GSQGHFGHPA MMIIIDALGE DLLLSNTSNN WHLAEQRWQA HRSETSVGDQ LPYELYYRVI
GNANIGIASI DNAAGTQPER NQVKGEALAL RAFSYFNLVQ LYGKRYDAAA KPNSQLGVPL
VLTPTTEGLP RATVEEVYTQ VNKDLADAAT LLTSTRSFKS HINLEVIKGL QARVALTQQN
WADAAKFAAE ARKGFSLMSI AQYQEGFSDI GNPEWMWGFD HVEDQSEFFG AFHSYMSSNY
NSTNIRVTPK AINSLLYDQI PATDVRSKMW VKAPTTANSI VPTGGVRVPY MNQKFRLPGT
PSTSAMGDIP YMRVAEMYLI EAEAQARLGN ATAAASTLFD LVSKRDPSYK LSTSTGAALL
NEILFQRRIE LWGEGFRFTD LKRMNMALNR NGTTNTNSAV VVLFDVAPGD VQWEFLIPRR
ELNANKAVVQ NPL
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