| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6446 |
|---|
| Symbol | |
|---|
| ID | 8730230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7815227 |
|---|
| End bp | 7816039 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003391202 |
|---|
| Protein GI | 284041272 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAT TCTTACAACA ACTGAATCAG GTAAATCCGC CCCTGTATGC GTTCGGGTGG
GTCTGCTTGC TGGGGGCAGG GCTGTGCCTG GCGCTAACCC AGCTGACCCA TACGCAGGTA
ATGGGCGTGA ATGCGTGGTA CAAGCCGATG AAATTCTGCC TGTCGATAAC GCTGCTGGTG
TGGACCATGG GCTGGTACGG GCAGTATCTG GGCCGGTCGG AGGCCATGGT GGCCTATTCG
TGGGGAATGA TCGGGCTGCT GGGCTTCGAG ATTATCTACA TTGTATTCCA GGCGGGCCGG
GGGCAGTTGT CGCACTTCAA CCTGAGCAGC CCCTTGTACT CTGCCCTGTA TAGCCTGATG
GCCGTAGCCG CCACAGGCGC GTCGCTCTGG ACGGGCTACA TCGGCCTCTT GTTATATCGT
GCCGACCTCT CGGTCCTGCC CCGTGCGTAC GTCTGGGGCA TTTATTGGGG AATTGGGCTA
TTCGTACTCT TTTCAATGCA AGGCTTCGCG ATGGGCGGTC GGCTGACACA CACCATTGGC
GGACCGGATG GTAGCCCCGG TCTGCCCATC GTAAACTGGA GCCGACGCTA CGGCGACCTG
CGTATCGCCC ACTTTTTGGG GATGCACGCC TTGCAGGTGC TGCCCCTGCT GGGCTTTTAC
GTGCTCAGGA GCAGTCGGTG GCTTGTGGTG GTGAGCCTCT GCTACGCCCT GCTTACCGCA
GCCGTGTTTT GGCAGGCTCT TCGGGGGAAA CCTCTGCTGC CCCGCGTCAA CTCGTCGGAT
CAGTCACCTC CTAACCGCCT GACATCCGGG TAA
|
|---|
| Protein sequence | MKPFLQQLNQ VNPPLYAFGW VCLLGAGLCL ALTQLTHTQV MGVNAWYKPM KFCLSITLLV
WTMGWYGQYL GRSEAMVAYS WGMIGLLGFE IIYIVFQAGR GQLSHFNLSS PLYSALYSLM
AVAATGASLW TGYIGLLLYR ADLSVLPRAY VWGIYWGIGL FVLFSMQGFA MGGRLTHTIG
GPDGSPGLPI VNWSRRYGDL RIAHFLGMHA LQVLPLLGFY VLRSSRWLVV VSLCYALLTA
AVFWQALRGK PLLPRVNSSD QSPPNRLTSG
|
|---|
| |