| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6433 |
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| Symbol | |
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| ID | 8730217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7796368 |
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| End bp | 7799409 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003391189 |
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| Protein GI | 284041259 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.234793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTA AATGGCTACT TTTTTGTGGC GTCCTGCTTC CCGCACAGGG AGTACTCGGC
CAGCAAATTG CCAGCAATAG CAGTCCGCTA TATGCTTCTG TCAGATCAAC GGTTACCGGA
CTACGTGCGT CGGAGACGGC GGTGATTACC GTGACGGGAA AAGTGACCGA CGAGAAAGGC
GACGCGCTGC CCGGCGCTAC CGTTTCGCTG AAAGGCGGCT CCGTCGGGGC AAATACCGAC
GCCGACGGCA ACTACACCCT CCGTATCCCC GACGGCACCC CGAATCCGGT GCTGGTCTTT
TCGTTTATCG GCTACACGTT GCAGGAAGTT GCCATTGGCA ACCAGACCGT GGTGAACGTA
CAACTCAAAG GTGATGCAAA ATCCCTGAAC GAAGTCGTCG TGGTCGGTTA CGGTACCCAG
AAACGTTCAG ACATTACCGG TTCGGTGGCG TCTGTACCCA AAACCCGTTT GTCGCAGTTA
CCCGTTACCA ACGTGTTGCA GGCCATTCAA GGCTCAGTGG CGGGTGTCAA CATCTCGCAG
TCGTCGTCGG TACCGGGAGC CGCGCCGTCA ACGACCATCC GCGGGCAGAA CTCCATCAAC
GCCAACTCCG GCCCCTATGT GGTTGTCGAC GGTATTCCGC TGAGCAAAAC GGGCGGCTCG
CTGAGCGACA TCAACCCCAA CGACATCGAG TCGATGGAAG TACTGAAAGA TGCCTCGGCG
GTGGCTATTT ACGGTACCAA CGGCGCCAAC GGCGTTATTC TTGTGACAAC CAAACGGGGT
AACACCGGCA AGCCGACCAT CCGGTATAAC AACTACGTGG GTGTCGAAAA CTTCGCACAT
ATGCTGCGTC CGCGCAACGG CGCTGAGTAC GTGCAGAAGT ACGCCGATTA CATGGCCCAG
ACCGGCCAGA AACTGGTCAA TCCGGTGCCT AACTACGACG AGTTGGCCAA CTACAACGCG
GGCATCACCA CCGACTGGAT GAAAGAAGCG ACCCAGACGG GCGTGTTGCA GGACCACAAC
CTGAGCATTT CGGGTGGATC GCCCAATGTG CGGTACTTCA TCTCGGGTGA GTTTCTGGAT
CAGAAAGGCG TTATCAAAGG CTATCAGTAC AAGCGGGCCA GTTTCCGCTC CAATCTGGAC
GTTACCCTGA CGGATTACCT GACGGTGGGC ACCTCGCTGT TCATTGCCAA CAGCAACCGC
GACGGCGGCC GCGCCAACAT GCTCAACGCA TCGGCCATGA GCCCCTACGG GCAGGAGTAC
AACGCCGACG GGACCTACCG CATTTACCCC ATGTTCCCGG AGCAGTTGTA TACCAACCCA
ATGATTGGCC TGACCGTCGA CCGCGTTGAC CGCAACACCA ACCTGAACGG GAACGCCTAC
CTCGAACTGA AACTGCCGGG CAAACTGAAC GGGCTGAAAT ACCGCATGAA CCTCGGTTAC
TCGTACATTC CGGCCCGCAC GGCGAGTTAT AATGGCCGGG CGGCCAACGA CCTGCTCGGT
ACGGCCAACA CGTTCTTCTC CGAAACCAAC AGCTTCACCC TAGAAAATAT CCTGTCGTAC
AGCCGGGATT TCGGCAAGAA CCACTTCGAC TTCACGGGTC TGTACAGCGC CCAGCAGCGG
AAATACGCCA CCGCAACCGG AACGGCAACG GGCTTTGTCA ACGACCAGTT GTCGTTCAAT
AACCTGGGGG CCGGTGCCAC GCAGTCGAGT AACTCCTATG CCGACCGCTA CGGCCTGAAC
TCGCAAATGG GTCGGGTCAA CTACTCGTAC GACAGCCGGT ATCTGTTCAC CGTTACGGCC
CGTCGCGATG GTTCGTCAGT GTTCGGAGCC AATACTACCA AGTACGGCCT GTTTCCCTCG
GCGGCTATCG GCTGGAACAT CAGCAATGAG GCTTTCATGA AAAACGTGAA CCTGGTGAGC
AACCTGAAAC TGCGTTTCTC GTACGGCAAA TCGGGTAACG AAGCCATCAG CGTATACCGG
ACCATTACGA CCGACAACAC CGTTCGGTCG CCCTTCAACG GCGTGAGCAC CATCGGCGCA
CAGCCGGGCA ACCTGGGCAA CGCCAATCTG CAATGGGAGA CGACCCTCAG CCGCAACATC
GGCGTAGATT TCGGTATCCT CAACAACCGC ATCAACGGTA GCCTTGATCT GTACAAGAAT
AACACCAAAG GATTGCTCCT ATTGCGCAGC CTACCCATCC TGACCGGCTA TTCGAGCGTA
TACGATAACC TCGGCGAAAC GTCGAACACC GGTATCGAAC TCACGCTGAA CACCCGAAAC
GTAACGAATG GCGATTTCAA ATGGGAAAGC ACCGTTGTAT TTGCCTCCAA CCGCAACCGC
ATTCTGGACC TCTACGGCGA CAAGAAAGAC GACCTCGGAA ACCGCTGGTT CATTGGTCAG
CCCATCAGCG TGGTGTACGA CTACAAACTG GCCGGTGTCT GGCAAACGGG CGAAGACGCG
TCCTCGCAGG ACCCCGGCGC GGTGGCCGGT GACCTGAAAT TTGCCGACCT CAACGGCGAC
AAGAAGATCA CCGCCGACGG CGACCGGATG ATTCTGGGCC AGACGGCTCC CAAGTGGACC
GGTGGCCTGA CGAACACCTT CCATTACAAG AATTTCAACC TCAACGTGTT TATCCAGACG
GTTCAGGGCA TAACCCGCAA TAACGCCGAC CTGACCTACG CCGACGAAAC CGGCAAACGG
AACACGCCCA TCGACGTGGG GTACTGGACG GCCAACAACA AGAGCAACAC CCGCCCGTCG
CTGGCGTTCA AGAACCCACG GGGCTACGGC TATGCGTCGG ATGCGAGCTA CACCCGTATC
AAGGACGTAA CGCTGAGCTA CGTCTTCGAT CAGAAACTGC TTGATAAACT GCACCTGGGC
AGCCTGACAG TTTATGCCAG TGGTCGTAAC CTGTACACCT TTACCAACTG GATTGGCTGG
GACCCCGAAG CGGTGCAGTC TTCCCGCGGC TCCGGCGACT GGACGAACAA CTACCCGCTG
ACCCGCTCTT TTGTGATGGG CCTTAACATC AGCCTTCGCT AA
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| Protein sequence | MDIKWLLFCG VLLPAQGVLG QQIASNSSPL YASVRSTVTG LRASETAVIT VTGKVTDEKG
DALPGATVSL KGGSVGANTD ADGNYTLRIP DGTPNPVLVF SFIGYTLQEV AIGNQTVVNV
QLKGDAKSLN EVVVVGYGTQ KRSDITGSVA SVPKTRLSQL PVTNVLQAIQ GSVAGVNISQ
SSSVPGAAPS TTIRGQNSIN ANSGPYVVVD GIPLSKTGGS LSDINPNDIE SMEVLKDASA
VAIYGTNGAN GVILVTTKRG NTGKPTIRYN NYVGVENFAH MLRPRNGAEY VQKYADYMAQ
TGQKLVNPVP NYDELANYNA GITTDWMKEA TQTGVLQDHN LSISGGSPNV RYFISGEFLD
QKGVIKGYQY KRASFRSNLD VTLTDYLTVG TSLFIANSNR DGGRANMLNA SAMSPYGQEY
NADGTYRIYP MFPEQLYTNP MIGLTVDRVD RNTNLNGNAY LELKLPGKLN GLKYRMNLGY
SYIPARTASY NGRAANDLLG TANTFFSETN SFTLENILSY SRDFGKNHFD FTGLYSAQQR
KYATATGTAT GFVNDQLSFN NLGAGATQSS NSYADRYGLN SQMGRVNYSY DSRYLFTVTA
RRDGSSVFGA NTTKYGLFPS AAIGWNISNE AFMKNVNLVS NLKLRFSYGK SGNEAISVYR
TITTDNTVRS PFNGVSTIGA QPGNLGNANL QWETTLSRNI GVDFGILNNR INGSLDLYKN
NTKGLLLLRS LPILTGYSSV YDNLGETSNT GIELTLNTRN VTNGDFKWES TVVFASNRNR
ILDLYGDKKD DLGNRWFIGQ PISVVYDYKL AGVWQTGEDA SSQDPGAVAG DLKFADLNGD
KKITADGDRM ILGQTAPKWT GGLTNTFHYK NFNLNVFIQT VQGITRNNAD LTYADETGKR
NTPIDVGYWT ANNKSNTRPS LAFKNPRGYG YASDASYTRI KDVTLSYVFD QKLLDKLHLG
SLTVYASGRN LYTFTNWIGW DPEAVQSSRG SGDWTNNYPL TRSFVMGLNI SLR
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