Gene Slin_6421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6421 
Symbol 
ID8730205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand- 
Start bp7781486 
End bp7782253 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID 
ProductPHP domain protein 
Protein accessionYP_003391177 
Protein GI284041247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.850733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT GGAAACAGTT AAAAACACGG CTCACACAGA ATCTGGCAAA CGATCCGAAA 
GCAGTGGAGG AGGCCTGTTT CTGGCGCGTT GATATGCACT CGCATTTACT CCCCAATGTC 
GACGATGGTG TTAGTAGTCC AGAAGAGACC CTGGCTTGCC TGCAGCAGAT GGCCGCCTGG 
GGTATTCAAC GGGTCATTAC CACACCGCAC GTTAGCCGCG ACTGGTACCC CAACTCGTCC 
GATATGTTAC GGGCGGGCCA GTTGGAATTG CAGGAACTAG CCGATTCGCA TGGGCTGGCT 
TTGCAAATTG ACGTTGCTGC GGAGTATATG CTCGACGAAT TTTTTCCGGA CCTACTCGAT 
AAAAACGACC TGATGACGTT TGGGAAGGAA CGTTATGTGC TTATAGAAAC CGGATGGGCA 
GCCGCTCCAC AGCAGCTCGA AGATGTATTA TTCCGCCTTC AAACCAAAGG TTACATGCCC 
GTTCTGGCTC ATCCTGAACG CTATACTTAC TACCATGCAG ACGAAGCTGC GCTGGCCCGA 
CTCCATGAAA TTGGCTGTCT GTTTCAGCTT AACTGGCTTT CGCTGACGGG TCGGTACGGC 
CGAAAAGTTC GTACTCAGGC ACAGCGCATA CTGCATAATA ACTGGGTCGA TTTTATTGGC 
AGTGATCTCC ATCGGGCAGA AGACCTGGAT GCGCTTGCCT CGTTATTTAC CCTGCCCGAG 
TATGAGCTAC TCCGCTCCCA GCCCCTGCGG AATGAGTCGT TGCGTTAA
 
Protein sequence
MNFWKQLKTR LTQNLANDPK AVEEACFWRV DMHSHLLPNV DDGVSSPEET LACLQQMAAW 
GIQRVITTPH VSRDWYPNSS DMLRAGQLEL QELADSHGLA LQIDVAAEYM LDEFFPDLLD 
KNDLMTFGKE RYVLIETGWA AAPQQLEDVL FRLQTKGYMP VLAHPERYTY YHADEAALAR 
LHEIGCLFQL NWLSLTGRYG RKVRTQAQRI LHNNWVDFIG SDLHRAEDLD ALASLFTLPE 
YELLRSQPLR NESLR