Gene Slin_6416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6416 
Symbol 
ID8730200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7774935 
End bp7776029 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391172 
Protein GI284041242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.081644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTC TGCGCATTTT CCTGACAGCC TGGTTAATCC TGGAGAGCTG TATAGGAGCC 
ATCGGTCAGG TACAGGAACC GGAAGAGCGG GAAATAGGGG TTATTGCGCT GGCTGGTTTA
ACGAAAGCGA GTCACATAAC CCCCGCTTCT ACCCAAACCC CGGTTGGTAT TGAAGTCCGC
TATAGTGTGT TACACACGCG TCGTGAATCG TGGGAACAGT GCCAGTGTTT CTTCCGGTCG
GGTGTTTTTG TCAATGCCTA CTCATTCCGC AATCCGGTCG TTCTCGGGCA GTCGATTGGT
GGGGGGCTAT TTTATGAACC CGTACTCGTA CATAGGCCCC GATGGGGGCT TTCGCTTCGG
GCTTTGGCGG GCATTACCTA TGTATCACGC AGTTACGGAG CCATCACCAA TCCGGGCAAC
GTTGCGTTTG GAACACCGAT CAACGGATTG ATTGGTGGGG GTTTATACGG CCGCTTCACC
CTGGCAACCG GCTGGCGTTT ACTGGCGGGG CTGGATTACA AACATATCTC CAACGCGGGT
ATTCGACTAC CCAATCAGGG CCTCAATATT CCGGCTTTAT CTGTTGGTAT ACAACGGTAT
ACAATGAGCG GACGCTTGCC TGATACGCGT ACCTGGCAAC CGACCCAGAT GGATAAACGC
TGGATGTTTC GTGCCCTGGC CATAGCCTCG GCTAAAGTGC TGGAAGCTAA CGATCGTGAC
CCTGAGCAGG CTTACCCTAT TTTCGGGTTG ACCCTGATCG CGGGTTATCA CCTGACCCGA
TCTCATGTAC TATCGGGTGG TTTTGAAATG ATCGACGACC AGTATTTCAA GGAGCAGATT
CGTCGATGGA CAGGACGTTA TCAACCTTAT CGGCAAGGGA CGCTGCTGGC AGGCTATGAG
TTCTGGCAAG GGCATTTCTC CTTCACGGCT CACATGGGCT GGAATGCCGT GCGCCCACTC
TGGTATAAAC CCGCTACCTA TCAGAAATAC GGGCTACTCT ATCGGTTCGG GAATGGGTTC
ACCACGGGCG TTGTCGTGAA GACCTATGGC GATAACACCA AAAACTTTCA GGCTGTAGCC
GGGATGACTT TTTGA
 
Protein sequence
MSTLRIFLTA WLILESCIGA IGQVQEPEER EIGVIALAGL TKASHITPAS TQTPVGIEVR 
YSVLHTRRES WEQCQCFFRS GVFVNAYSFR NPVVLGQSIG GGLFYEPVLV HRPRWGLSLR
ALAGITYVSR SYGAITNPGN VAFGTPINGL IGGGLYGRFT LATGWRLLAG LDYKHISNAG
IRLPNQGLNI PALSVGIQRY TMSGRLPDTR TWQPTQMDKR WMFRALAIAS AKVLEANDRD
PEQAYPIFGL TLIAGYHLTR SHVLSGGFEM IDDQYFKEQI RRWTGRYQPY RQGTLLAGYE
FWQGHFSFTA HMGWNAVRPL WYKPATYQKY GLLYRFGNGF TTGVVVKTYG DNTKNFQAVA
GMTF