Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6412 |
Symbol | |
ID | 8730196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7770108 |
End bp | 7770890 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | glycosyl transferase, WecB/TagA/CpsF family |
Protein accession | YP_003391168 |
Protein GI | 284041238 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.848154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACTC AATTTTCTAA AACCTCTTTA TTTGGTATTC CCTACGCTTC GGTTGATTAT GCATCGGCAA CCAGGATAAT TATAGAGAAT GCCTTAACCA GAACCAGTTT CGGCGTTTCA GCACTGGCTG TTCATGGGCT CATGGAATCG AAACACAACG AGACTATTGG CCAGCACGTG TCCCGGATCA ACATGGTTGT TCCCGATGGG AAGCCAGTAC AATGGGCTCT GAACGCCTTT AACAAGGCAG ATCTCAAAGA CCGTGTTTAC GGGCCTGACC TCACACGTCA CGTATTAAAA GCCGCCGGAG AGCAGCACCT GAAAGTGTAT CTGTACGGAA GCACAGAATC GACCCTGACT AAGCTTAAAG AATATATTCC ACAGACATTT CCGGGTGTTA CCATTTGTGG TATTCACGTT GATCGCTTCC GGGATGCAAC CCCAGAGGAG AAAGCGGAAG ACATTAAAAA AATAAATGCC TCCGGAGCCA ACATAGTGCT GGTTGGGCGT GGTTGCCCCC GGCAGGAAAT CTGGGTATCC CAGCACCTGG GCGAAGTAAA TGCGGTAATG ATGGCCGTTG GAGCGGCATT CGATTATTTT GTTGGCAATA TCAAACGCCC TCCCGTATGG ATGCAACAGT CTGGCCTGGA GTGGCTATTC CGCCTGTCGC AGGAGCCACG GCGTTTATTC AAGCGTTACG CTGTTACTAA TTCTCAATAT ATCTTTTACG TTGTACAGAA GTTGATTAGC CAGCGGGTAT TAGGCATCAC TACACAGCGT TAA
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Protein sequence | MPTQFSKTSL FGIPYASVDY ASATRIIIEN ALTRTSFGVS ALAVHGLMES KHNETIGQHV SRINMVVPDG KPVQWALNAF NKADLKDRVY GPDLTRHVLK AAGEQHLKVY LYGSTESTLT KLKEYIPQTF PGVTICGIHV DRFRDATPEE KAEDIKKINA SGANIVLVGR GCPRQEIWVS QHLGEVNAVM MAVGAAFDYF VGNIKRPPVW MQQSGLEWLF RLSQEPRRLF KRYAVTNSQY IFYVVQKLIS QRVLGITTQR
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