| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6398 |
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| Symbol | |
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| ID | 8730182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7751979 |
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| End bp | 7754306 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | capsular exopolysaccharide family |
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| Protein accession | YP_003391155 |
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| Protein GI | 284041225 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA ATGCTTACTC ATACATGCCC TACCAGGTCT ATGCTCCTGA GAACCAGGTC
AACCTTAGGG TAATATTACT TCGTTACCTG AAGCACTGGA AGTGGTTTGC TTTATCACTG
ATATTGGCTG GCGCAGCTGC TTATGTATAT CTGCTTTATC AAACACCAAT CTATAAGGTT
CAGGCAAGTT TGTTAATCAA AGATGACAAG AAAGGACTGG ATGGTGAGAA CATCCTGAAA
GAAATGGATA TTCTTAAACC GAAGAAAACG GTTGAGAACG AAATTGAAAT TGTGCAGTCC
TACACGTTAA TGGACAAAGT GGTTGATCAT CTTAACCTCA ACGTTCAATA TTTTAAGCCA
ACGTCTACTA TCGATAAGGA GGTTTATGGT AATTTACCTA TTCGGCTGGT TGTAGAACGG
CCTGCTTCAG CCTTATACGA CGATAAGCTT GATCTAAGCT TCGTTGATGC GCAGCACATC
AAGCTGAACG ATCGGACGTA CCCCGTCAAC CAATCGGTCA ATACCCCATA TGGACGGCTT
CGCTTTTTTA CCCGTCAGCC TTTAACTGCC TCGTTTGAAC CGATGAAAGT TAAAGTGTCG
CCCCGTACAG AAACGGTCAA TAACTTACTG AAAAACTTAA CCGTTGAAAC AACTAGTAAG
GCATCGACAG TATTATTGAT AACTCTCGAT GAGGCTGTAC CCGAAAAAGG AGAAGCGCTG
CTCAAGCAGC TAATCGAGGA ATACAACCAG GCGGCCGTTG TCGATAAAAA CCTGGTTGCG
GCCAGCACGC TCGATTTTAT CGAAGATCGT CTTCGGTTGA TCTCCGGTGA ACTGACAACG
GTAGAGAAAG ATGTAGAATC GTATAAAACA AGCCAGGGTA TAACAGATCT GAGTACACAG
GCGCAATCGT TTCTGCAAAC GGTACAGGCC AACGATGCTC AACTTAATCA GGTAAATATT
CAACTGGGTT CACTGAATGA CATTGAACGA TACGTGACCA GTAAAGGCGC TACACGGGGT
GCGGCTCCTG CAACGCTTAG CCTGAGCGAT CCGGTGCTGT TAGGGTTGGT AACGAAAGTG
TCTGAGCTCG AGTCGCAGCA TGATCTGTTG GCCCGCACGA CGTCGGACCG AAACCCGCTG
CTGCAATCGC TGGATAGCCA GATTAAAGCC ACAAAAGAGA GCATAAGTGA GAATATTCAG
ACGATAAAGA CTCAATTGAT CAGCACTCGC AATCAGCTTA CATCGACCAA TAAGCGGCTC
GAAGGTATGG TGCGCACTGT TCCCCACAAA GAGCGGGCGT TGCTGAACAT TACCCGTCAG
CAGGCGATCA AAAACAACTT GTATACGTAT TTGCTGCAAA AACGCGAAGA GACGGCTTTG
TCCTATGCGT CTACGTTGCC TGATAGCCGC ATTGTTGATA TGCCCCGGCA TGATGAGAAA
CCGATCAAGC CGGTTCGCGG CATGACGTTT GCTCTATTTG GCCTCTTTGG TTTATTGTTT
CCTATTGGCG TAATGGCTAC CCGGGATGCG CTGAATAACC GCGTTCGTCG TCGTTCTGAT
GTTGAAGAAG CTTCGCAAGT CCCCATCCTG GGTGAAGTGG TGAAGTCAGA TGGTTCAAAG
GCGCTGGTCG TCGTATCGAA TAGTCGTTCG GTCATAGCGG AACAAATACG GGCACTTCGA
ACAAACCTGC AATTTTTGCG GAGTAGTCAA ACGGGTTGCC AGGTTGTCCT GTTTACATCG
AGTATCAGTG GCGAAGGAAA GTCATTTATG TCGCTTAACC TGGGAGCAAG TTTAGCACTG
GTCGATCGTC CTACGGTTAT TTTGGAAATG GACCTTCGCA AACCTAAGCT TCATAGCTCA
TTGGGTATGC GTAATCCAGT TGGGATTAGT AATTACCTGA TTGGCGAGGC CACCCTGGAT
GAGGTACTAC AGCCTATTGA AGGATTTCCC AACTACTTCC TGATAAGCAG TGGTCCTCTG
CCCCCAAATC CATCTGAATT ACTGAATGGC CCTCATCTGG CTCGTTTGTT CACCGAGTTA
CGCCAACGGT TCGATTATGT TATTGTCGAT TCGCCACCCA TCGGTCTGGT AACGGATGCG
CAGGTGATCG CTCCCCTGGC AGACGCGACC CTCTACATGG TACGTCATGA CATTACGCCG
AAAACCTACC TCAAAATGGT CGATACGCTC TATAAAGAGC ATCGGTTCCA GAACCTGAAT
GTCATCCTGA ATGCTGTTGA TGACGGTGAA TCCTATTACT ACAGTTATAG CTACGGCGGT
TACTACCAGG AAGACAAGCC ACAACGCCCT AAGCTCAAAG CTGAATAG
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| Protein sequence | MSENAYSYMP YQVYAPENQV NLRVILLRYL KHWKWFALSL ILAGAAAYVY LLYQTPIYKV
QASLLIKDDK KGLDGENILK EMDILKPKKT VENEIEIVQS YTLMDKVVDH LNLNVQYFKP
TSTIDKEVYG NLPIRLVVER PASALYDDKL DLSFVDAQHI KLNDRTYPVN QSVNTPYGRL
RFFTRQPLTA SFEPMKVKVS PRTETVNNLL KNLTVETTSK ASTVLLITLD EAVPEKGEAL
LKQLIEEYNQ AAVVDKNLVA ASTLDFIEDR LRLISGELTT VEKDVESYKT SQGITDLSTQ
AQSFLQTVQA NDAQLNQVNI QLGSLNDIER YVTSKGATRG AAPATLSLSD PVLLGLVTKV
SELESQHDLL ARTTSDRNPL LQSLDSQIKA TKESISENIQ TIKTQLISTR NQLTSTNKRL
EGMVRTVPHK ERALLNITRQ QAIKNNLYTY LLQKREETAL SYASTLPDSR IVDMPRHDEK
PIKPVRGMTF ALFGLFGLLF PIGVMATRDA LNNRVRRRSD VEEASQVPIL GEVVKSDGSK
ALVVVSNSRS VIAEQIRALR TNLQFLRSSQ TGCQVVLFTS SISGEGKSFM SLNLGASLAL
VDRPTVILEM DLRKPKLHSS LGMRNPVGIS NYLIGEATLD EVLQPIEGFP NYFLISSGPL
PPNPSELLNG PHLARLFTEL RQRFDYVIVD SPPIGLVTDA QVIAPLADAT LYMVRHDITP
KTYLKMVDTL YKEHRFQNLN VILNAVDDGE SYYYSYSYGG YYQEDKPQRP KLKAE
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