Gene Slin_6394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6394 
Symbol 
ID8730178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7748045 
End bp7748752 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID 
Productpeptidase M22 glycoprotease 
Protein accessionYP_003391151 
Protein GI284041221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0429104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA TTCTTTCTCT CGATACATCA ACGGCCATCT GTTCAGTAGC TCTGCACAGC 
ACCGAAGGTT CACTCAGCAG TTCACTGCTC GGCTCCTATG AGCTCTTTAC AGAACGAACC
TCTTCCGCTA TGCTCACAAC GCTCATCAGC GATATTGTGC GACAGGCAGG TTATGAGCTA
ACCCAGCTTG ATGCTATCGC TGTAGCCAAA GGACCTGGCT CTTACACGGG GTTGCGCATT
GGAGTTTCGA CAGCAAAAGG ACTTTGCTTT GCGCTGGATA AACCTCTACT GGCCATCAAT
ACGCTAACGG CTATGGCCGA ACAAGTCCGT TCTTTCTACC CCACAGACTA TATACTGTGC
CCTATGATTG ATGCCCGCCG TATGGAAGTC TACTGCGCCC TATACAATAC AGATGGGCAG
GAAATGCAGC CAACGACGGC ACAGATTATT GATGAGCAAT CATTTGACGA GTGGCTGGCA
CAGAAGCCCG TGGTCTTTTT TGGTGATGGA GCCGCAAAGT GCGAAGCCCT GCTAGGCGGT
CATGTCAACG CCCATTTTCC TACGATACCG ATCCATCCTT CGGCCAGAAC CGTTGGGCAG
TTGGCCATCG TAGCCTATGC CCGCAGCGAA TTTGAAGATA CCGCTGCCTT TGAGCCCTTT
TACCTGAAAG ATTTTATGGC CATAAAGCCT AAAAAGGCCC CGTTTTAG
 
Protein sequence
MPLILSLDTS TAICSVALHS TEGSLSSSLL GSYELFTERT SSAMLTTLIS DIVRQAGYEL 
TQLDAIAVAK GPGSYTGLRI GVSTAKGLCF ALDKPLLAIN TLTAMAEQVR SFYPTDYILC
PMIDARRMEV YCALYNTDGQ EMQPTTAQII DEQSFDEWLA QKPVVFFGDG AAKCEALLGG
HVNAHFPTIP IHPSARTVGQ LAIVAYARSE FEDTAAFEPF YLKDFMAIKP KKAPF