Gene Slin_6387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6387 
Symbol 
ID8730171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7741983 
End bp7743005 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content53% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003391144 
Protein GI284041214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0741751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACCC TTGCCATTGT TATTCTTAAC TACAACGGTC AGCCGTTTTT AGCTAAATTT 
CTTCCCACGG TTCTTGCCAA TGCCGACGGC CATCCGGTTT ATGTAGCGGA TAGTGCATCA
ACAGATTCCT CGGTGCCTTT CCTGAAGGCC AATTTTCCGG CCGTCCGCGT TATTGAGCTT
CCCCGAAACG AAGGCTATGC GGGTGGATAC AATCTGGCTC TTGAGCATAT TCGCACGCAT
TTCGGCGGAG CTACCTACTA CGTCCTGCCT AATTCCGACA TCGAAGTAAC GCCCGGCTGG
CTGTCGCCGG TGCTGGATTT GTTGAAAGCG AACCCTACTA TTGCGGCCTG TCAGCCCAAG
ATCCGGTCGT ACGCCCAACG TGATCTATTT GAACATGCGG GGGCCGCTGG TGGCTTCGTC
GACTGGCTGG GGTATGTATT TTGCCGGGGG CGCATCTTCG CTACTTTCGA AACCGATCAT
GGGCAATACG ACGACAATCG GCAGGTGTTC TGGGCAACGG GTGCCTGCCT GTTCATGCGG
GCCGACGTGT TTCATGAAAC GGGTGGCTTC GACGGTTCAT TTTTCGCGCA CATGGAAGAG
ATCGACTGGT GCTGGCGGGT TCAGCGGCTG GGGTACGAAG TCTGGGCGTG CGGGCAGTCG
ACGGTTTACC ATGTAGGTGG CGGTACGCTC CATAAATCCA ATCCTCACAA AACGTTTTTG
AATTACCGGA ACAGCCTGTT CATGCTGTAC AAGAACTGGC CCGCCGATGG CTGGCTATGG
CCGAAGATCA TGCTGCGACT GATTCTTGAC GGAGCGTCGT CGATCCTGTT CCTGCAGGTT
GGGCAATGGC GTGATGTCTG GGCTATTATA CGGGCTCATT TTTCCTTTTA TGGCCGGTTA
CCGCAGCTTC ATGCTCAGCG CAAGCTGCTG AAAACACAAC AGACGAAACA GGTAAAATTG
TATCCCCACA GCCTTGTCTG GAAATACTTT GCCGAAGGGA AAAAGATGTT TGGAGAAATG
TAA
 
Protein sequence
MDTLAIVILN YNGQPFLAKF LPTVLANADG HPVYVADSAS TDSSVPFLKA NFPAVRVIEL 
PRNEGYAGGY NLALEHIRTH FGGATYYVLP NSDIEVTPGW LSPVLDLLKA NPTIAACQPK
IRSYAQRDLF EHAGAAGGFV DWLGYVFCRG RIFATFETDH GQYDDNRQVF WATGACLFMR
ADVFHETGGF DGSFFAHMEE IDWCWRVQRL GYEVWACGQS TVYHVGGGTL HKSNPHKTFL
NYRNSLFMLY KNWPADGWLW PKIMLRLILD GASSILFLQV GQWRDVWAII RAHFSFYGRL
PQLHAQRKLL KTQQTKQVKL YPHSLVWKYF AEGKKMFGEM