Gene Slin_6384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6384 
Symbol 
ID8730168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7738000 
End bp7739298 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content54% 
IMG OID 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_003391141 
Protein GI284041211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.929985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA ATAATAGTAC CAACTCTGAG ATAAATTCTG CGAACGAGGA AAATCCTGCC 
GAGTCGAACC CCATCCGGCT GGATCGGATC GAAGATGCCA TTGCTGACAT AAAGGCGGGC
AAGATTGTAC TGGTCGTTGA CGATGAAGAT CGGGAAAACG AAGGTGATAT GATCTGCGCA
GCCGAGATGA TTACGCCCGA AATGGTCAAT TTCATGGTGC GCGAGGCCCG TGGGCTTATG
TGCGCTCCCC TCACGCAGGA ACGTTGCGAC GAGTTGGGCC TGGACATGAT GGTAACCAGC
AATACCTCGG TTCATACAAC CCCTTTTACG GTATCGGTCG ATTTGCTGGG TAATGGCTGC
ACAACGGGCA TCTCGGCATC CGACCGCTCA AAAACCATTC AGGCGCTGGT CGACCCCAAT
ACCACCCCCG ACGATCTGGG CCGACCCGGC CATATTTTCC CCCTGCGGGC GGTTGAAGGT
GGCGTTATCC GTCGGGCTGG TCATACCGAA GCTGCGGTGG ATTTAGCCAA ACTGGCGGGC
CTGTCGCCGG TGGGCGTACT GATTGAAGTA CTGAACGAAG ACGGCACCAT GGCCCGTCTG
CCTGAGTTGC GCGTGCTGGC CGACCGCTTT GGTATGCGAC TGGTCAGTAT TCAGGATTTA
ATTGCGTACC GGCTTCGGAC CGAAACGCTC ATCCGGCGCG AGATTGGTGT CGATATGCCC
ACCCAATGGG GGCACTTCGA CCTGATTGCC TATAAGCAAA GCAACACCGG CGATACACAC
CTGGCCCTTG TAAAAGGCAC CTGGGAGCCT AACGAGCCGG TTATGGTGCG TGTTCACTCA
TCCTGCGTAA CGGGCGATAT TTTCGGCTCC TGCCGCTGCG ACTGCGGGCC TCAGCTTCAT
GCCGCTATGG AACTCGTCGA AAAAGAAGGC AAAGGCGTGG TGGTGTATAT GTTTCAGGAA
GGGCGCGGCA TTGGCCTGAT CAACAAGCTC AAAGCCTATA AACTTCAGGA AATGGGCCGC
GATACGGTCG AAGCTAACCT GGATTTAGGC TTACCCATGG ATGCCCGAGA TTATGGTGTA
GGGGCGCAGA TTCTGCGTGA CCTTGGCATC CGTAAGCTTC GGCTGATTTC AAACAACCCG
AAAAAACGGG CTGGCTTAAT GGGCTACGGG CTGGAGATTG TCGACACTGT ACCCCTCGAA
ATAAAGTCCA ACCCGCACAA TGAGCGCTAC CTGCGAACAA AACGCGACAA AATGGGTCAT
ACCATTATGA ACGAGCCGGT TAATGAAGAA CAGGAATAA
 
Protein sequence
MMSNNSTNSE INSANEENPA ESNPIRLDRI EDAIADIKAG KIVLVVDDED RENEGDMICA 
AEMITPEMVN FMVREARGLM CAPLTQERCD ELGLDMMVTS NTSVHTTPFT VSVDLLGNGC
TTGISASDRS KTIQALVDPN TTPDDLGRPG HIFPLRAVEG GVIRRAGHTE AAVDLAKLAG
LSPVGVLIEV LNEDGTMARL PELRVLADRF GMRLVSIQDL IAYRLRTETL IRREIGVDMP
TQWGHFDLIA YKQSNTGDTH LALVKGTWEP NEPVMVRVHS SCVTGDIFGS CRCDCGPQLH
AAMELVEKEG KGVVVYMFQE GRGIGLINKL KAYKLQEMGR DTVEANLDLG LPMDARDYGV
GAQILRDLGI RKLRLISNNP KKRAGLMGYG LEIVDTVPLE IKSNPHNERY LRTKRDKMGH
TIMNEPVNEE QE