Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6377 |
Symbol | |
ID | 8730161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7730067 |
End bp | 7731089 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391134 |
Protein GI | 284041204 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.498537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.74546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCTT TTGTTAAAAA GATTACGCTG GCTGCCTGTC TGTTGGGCGC TGGTAACGTG TTAGTTAATG CCCAGCCGAC TTATTCATTT ATTCAGAAAA TCAGTCTGCC TACGGGTGAG GGAAAATGGG ATTACCTGAA AATGGATGGT GAGCGGGAAC GGCTTTTTGT CTCTCACTTC GACCGGGTAC ACGTCATCGA CCTTAAAACC AATAAACAGA TCGGTGAAAT TACCGGGCTC AAAGGTGTTC ACGGTATTGG TTTGGCTAAA GACCTTAATA AAGGCTATAT CACCAATGGG ACTGACAACA CCGTTACGGT TTTCGATTAC AATACCTTCA ACGTCTTACA AACAATTCCG GTAACGGGTA AGAAGCCCGA CGCCATACTA TACGATAAGA GCACGAAACA GGTTTTTGTC TTCAATAACG GGAGTGGCAA TGCGGTTGTC ATCAATGCCG TGACGGATAA AGTAGTCGGC TCGGTGGAGA TGGGGGGCGC ACCTGAGTTT GCCGTCTCGA ACGAGAAAGG CAGCCTCTTC AACAACAACG AAGACACCAA CGAGATTTTC GAAATCGACG CAAAGACCTT TAAGATCAAA AATAAATACT CGGTTGCACC CGCTGGTGGT GTACCGACCG GACTGGCCTA CGATGCGGGT TCGAACCGGT TGTTTTCGGT TTGCCGGAAG CCACAGGCAC TCGTGGTTAT GGATGCGTCG ACTGGAAAAA TTGTCCAGTC GCTGCCAATT GGTGGTGGGG TCGATGCGGT CGTTTACGAG AAAGACCTGA AACTGATAAT GACCTCGAAC GGCGAAGGCA ACGTAACAAT CATCCACCAG GATTCGCCGG ATACCTATTC AGTCGTTCAG ACGCTGACGA CCAGGCCTGG TCTTAAAACG ATGGTTCATC GGGGTACAAC GCATCGTATA TACCTGAGCG GTGCCGACTA CCAGGCCGAC GGAAAAACAC CGGCTCCCGG CACATTTGGC GTATTTGTGT ACGGACCACA AACCAGGCAA TAA
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Protein sequence | MISFVKKITL AACLLGAGNV LVNAQPTYSF IQKISLPTGE GKWDYLKMDG ERERLFVSHF DRVHVIDLKT NKQIGEITGL KGVHGIGLAK DLNKGYITNG TDNTVTVFDY NTFNVLQTIP VTGKKPDAIL YDKSTKQVFV FNNGSGNAVV INAVTDKVVG SVEMGGAPEF AVSNEKGSLF NNNEDTNEIF EIDAKTFKIK NKYSVAPAGG VPTGLAYDAG SNRLFSVCRK PQALVVMDAS TGKIVQSLPI GGGVDAVVYE KDLKLIMTSN GEGNVTIIHQ DSPDTYSVVQ TLTTRPGLKT MVHRGTTHRI YLSGADYQAD GKTPAPGTFG VFVYGPQTRQ
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