Gene Slin_6377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6377 
Symbol 
ID8730161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7730067 
End bp7731089 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391134 
Protein GI284041204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.498537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.74546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTT TTGTTAAAAA GATTACGCTG GCTGCCTGTC TGTTGGGCGC TGGTAACGTG 
TTAGTTAATG CCCAGCCGAC TTATTCATTT ATTCAGAAAA TCAGTCTGCC TACGGGTGAG
GGAAAATGGG ATTACCTGAA AATGGATGGT GAGCGGGAAC GGCTTTTTGT CTCTCACTTC
GACCGGGTAC ACGTCATCGA CCTTAAAACC AATAAACAGA TCGGTGAAAT TACCGGGCTC
AAAGGTGTTC ACGGTATTGG TTTGGCTAAA GACCTTAATA AAGGCTATAT CACCAATGGG
ACTGACAACA CCGTTACGGT TTTCGATTAC AATACCTTCA ACGTCTTACA AACAATTCCG
GTAACGGGTA AGAAGCCCGA CGCCATACTA TACGATAAGA GCACGAAACA GGTTTTTGTC
TTCAATAACG GGAGTGGCAA TGCGGTTGTC ATCAATGCCG TGACGGATAA AGTAGTCGGC
TCGGTGGAGA TGGGGGGCGC ACCTGAGTTT GCCGTCTCGA ACGAGAAAGG CAGCCTCTTC
AACAACAACG AAGACACCAA CGAGATTTTC GAAATCGACG CAAAGACCTT TAAGATCAAA
AATAAATACT CGGTTGCACC CGCTGGTGGT GTACCGACCG GACTGGCCTA CGATGCGGGT
TCGAACCGGT TGTTTTCGGT TTGCCGGAAG CCACAGGCAC TCGTGGTTAT GGATGCGTCG
ACTGGAAAAA TTGTCCAGTC GCTGCCAATT GGTGGTGGGG TCGATGCGGT CGTTTACGAG
AAAGACCTGA AACTGATAAT GACCTCGAAC GGCGAAGGCA ACGTAACAAT CATCCACCAG
GATTCGCCGG ATACCTATTC AGTCGTTCAG ACGCTGACGA CCAGGCCTGG TCTTAAAACG
ATGGTTCATC GGGGTACAAC GCATCGTATA TACCTGAGCG GTGCCGACTA CCAGGCCGAC
GGAAAAACAC CGGCTCCCGG CACATTTGGC GTATTTGTGT ACGGACCACA AACCAGGCAA
TAA
 
Protein sequence
MISFVKKITL AACLLGAGNV LVNAQPTYSF IQKISLPTGE GKWDYLKMDG ERERLFVSHF 
DRVHVIDLKT NKQIGEITGL KGVHGIGLAK DLNKGYITNG TDNTVTVFDY NTFNVLQTIP
VTGKKPDAIL YDKSTKQVFV FNNGSGNAVV INAVTDKVVG SVEMGGAPEF AVSNEKGSLF
NNNEDTNEIF EIDAKTFKIK NKYSVAPAGG VPTGLAYDAG SNRLFSVCRK PQALVVMDAS
TGKIVQSLPI GGGVDAVVYE KDLKLIMTSN GEGNVTIIHQ DSPDTYSVVQ TLTTRPGLKT
MVHRGTTHRI YLSGADYQAD GKTPAPGTFG VFVYGPQTRQ