Gene Slin_6375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6375 
Symbol 
ID8730159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7725679 
End bp7727106 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391132 
Protein GI284041202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.839642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACC AGATTCGTTT AGGTTTAGCC GCAATGGCAG TAGCGGGCGG TCTGATTGCC 
GGTCTTACCG GTTGCAGCAA ATCAGAAGAT GTACAGGTGT CGGCACCGCT TTTTAAAACG
GGGGCGGCCA TTAGCACGAA AACACCCTTA TCAGGCGTGG TGAAAGGCAC ATTGCTGGCC
GATTCGACCT ACCGGGTCAC CGGCGATGTA TTCATCAACG AAGGCGATAC ACTGACCATT
CAGCCGGGTG CCAAAGTCTA TTTTGATGGC AAAGGCGTAT GGAGTTTCAT TGTCAAAGGC
TCGTTACTGG CGTTGGGTAC CCAGGAGAAG CAGATTTACT TTACGGTGCC AACCGCTACC
AAAACCGACG TGCCGGGTGC CGACGTAACC AAAGACCCAG CCTACGCTGG TCTTTGGGGG
GGTATTCTGG GCGAATCAAC GTTCAAGAAC ATCATTATCA AATGGGCGCA CCTGGAGTTT
GGTGGTGGCA CGGTGGTGAC CTCGCCGGTA TCATTTATCG CCAATGGCGG AAAAGCTTAT
GTTATTTCTT CGGCTAACTC CGACGGTATT GTGGTGCTGG AAGACTCGTG GGTGTATGGC
GCGGTCGACG ATCCGATTCG TCCTTTTGGC GGTAAGTACA ATGTGATGCG GAATACGTTT
GAAAAGTGCG GTTTCACCGG TGGCGAAGCC TTCAACGTGA AAGGCGGCAC GGTTGGTAAT
TTTGCGTACA ACCTCATCGT TGGATCGGCG ACGAATGGGC CAAAAGCGTC AAATAACGGT
CAGAAGCCCG GCCAGCCGCA AACGAACGTT CTTTTCTACA ACAACACCAT TGTCCACAGT
GGCTACCGTC GGACGGCTGA TGGTCGGGGC GGCTCGATCA ATTTTGAAGA AGGCTCACGG
GGTGGTTATT ACAACAACCT GATGGTGAAT GACAAATACG GTCCCCGGAT TGTGGGCGCT
ACGCAGACCT ACTCGGGTAA TGCGCTGGTA GTAGCTGATA CGGCCAACAT TAAATATGGC
TACAACTACC ACTACGTCGA TTCATTGAAA ATGGCGAATC AGATTTATCC GGTTCTGTTC
GCTCAAAAGC CGCAAACGAC GGACTTCCCG GCACCATCAA CCTTCCTGCC TACGGGCTAC
AAGCCAGGTC AGGCGTATGA TGGGTCGGCA GTTGTTCAGA AGAACAACCC GCTGTTCGTC
AACTTCCCAT TGCCGTATGT GGCCACGAAG AAAGTAGCGG ATGTTTCCTA CGTAGGAACG
TGGAATTTTC GGTTGCAGTC GTCATCACCC GCTATTGGCA AAGGCACAAC GGGTTTCAGC
CCACTCACGG TAGTACCGGT AAGTGCTAAC TTCGGTTCAA CAGAAATCAC CCCGCCAAGC
ACCGATGTAG GCTGCTACCC CAGCAACGGA AAAGGTAATC AGCATTAA
 
Protein sequence
MNYQIRLGLA AMAVAGGLIA GLTGCSKSED VQVSAPLFKT GAAISTKTPL SGVVKGTLLA 
DSTYRVTGDV FINEGDTLTI QPGAKVYFDG KGVWSFIVKG SLLALGTQEK QIYFTVPTAT
KTDVPGADVT KDPAYAGLWG GILGESTFKN IIIKWAHLEF GGGTVVTSPV SFIANGGKAY
VISSANSDGI VVLEDSWVYG AVDDPIRPFG GKYNVMRNTF EKCGFTGGEA FNVKGGTVGN
FAYNLIVGSA TNGPKASNNG QKPGQPQTNV LFYNNTIVHS GYRRTADGRG GSINFEEGSR
GGYYNNLMVN DKYGPRIVGA TQTYSGNALV VADTANIKYG YNYHYVDSLK MANQIYPVLF
AQKPQTTDFP APSTFLPTGY KPGQAYDGSA VVQKNNPLFV NFPLPYVATK KVADVSYVGT
WNFRLQSSSP AIGKGTTGFS PLTVVPVSAN FGSTEITPPS TDVGCYPSNG KGNQH