| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6370 |
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| Symbol | |
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| ID | 8730154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7718527 |
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| End bp | 7720326 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding protein |
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| Protein accession | YP_003391127 |
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| Protein GI | 284041197 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.529318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA CAGGAGCCGA CCTGCTGGTC GAACGACTTT TAGAATGGGG TGTCGATACC
ATATTCAGCC TCCCCGGCGA CGGCATCAAC GGCATTTATG AATCCCTGCG TAACCGGCAG
GATAAGATCA AACTCATTCA GGTGCGGCAT GAGGAAGCTG CTGCCTTTAT GGCCTGTGGC
TACGCGAAGT TTACCGGTAA GCTGGGTGTT TGTCTGGCTA CGTCGGGTTG TGGCGGCATT
CATCTGCTCA ACGGACTCTA CGATGCCAAG TACGATTCGC AGCCCGTTTT GGCCATAACG
GGGCACACCG CCCACGATGT CAGCGGGACG TTTTATCAGC AGGATGTCGA TCTGGTGAAG
GTATTTGCCG ATGTAGCCGC CTACAACGAG CGGGTAATGG GGCCGGATCA CGTCGTGAAT
GTGCTCGACC AGGCCGTTCG TACGTCGCTG GGACAGCGTA CCGTTACGCA TATTTCGTTT
CCGAAAGATT ATCAGGAATG GACCGCGAGC GACGATACCC GGTCGCAGCC TAACGTACCT
AATCATAGCA GTGCCACGCG GGTGAGCCAC AATGTTGTCC CCGATACCCA CGAGCTGCAC
CGTGCCGCCG AGCTGATCAA TGCCGGTGAG AAAGTGGTCA TTTTTGCGGG TCGGGGTTGT
CTGGATGCCC GCGACGAAGT GCTGGCCCTG TCTGATGCCG TTGGCGGGCC AATTATCAAA
GCCCTGCTGG GCAAAGGCGT TGTGCCCGAT ACCGACCCGC ATACAACCGG TGGCCTGGGG
CTGCTGGGTA CCGCTCCCTC GCAGGATGCC ATGCAGGAGT GCGACACGCT GATCATGATT
GGTACGCGCT TCCCGTATCT CGAATATTTC CCGAAACCGG GTCAGGCACG CACCGTGCAG
ATTGACATCG ACCCGTCACA TATCGGACTA CGAACACCGG TCGAAATTGG GCTTCTGGGT
AGTAGTAAGG CCGTTTTGCA AGCCTTGTTG CCGCTCATCA AGCGTAAAGA CGACCAGAGT
TTCCTGGAAA AATCGCAGCA ACGCATGACA CACTGGAACG AGCTGCTCAC CGAGCGCGCA
ACTCAGGATG TTATGCCCAT GAAGCCGCAG GTGGTGCCGC ATATCATTAG CCCATTGCTC
AACGACGACG CCATTGTTAC CTGCGACTGT GGCAACAATA CAACCTGGGC CGCGCGGCAT
ATTCAGCTGC GGGGAACCAT GCAGTTTTCG ACGTCGGGAC TATTGGCTAC CATGGCCTCC
GGGCTACCCT ATGCCATTGC GGCCTCGGTG GCGCATCCGG GCAAGCAGGT GGTAGCGCTG
GTGGGCGATG GCGGCTTTAC GATGCTGATG GGCGAGCTGG CTACGGCGGT CAAATACAAG
CTGCCCATCA AGGTGTTCAT CTTCCACAAT AACTCGTATG GACAGATAAA ATGGGAGCAG
ATTGTGATGG AGGGAAACCC TGAGTTTGCC GTCGATCTGC ACTCCATCGA CTTTGCGGCC
TACGCACGGG CTTGCGGAGC AACCGGCTTC ACCATCGACG ATCCGAAAAA TGCCGACGCC
ATTATCCGGC AGGCGATGGC GTATGAGGGG CCGGTTGTTG TCGATGCTAT TGTCGATGCG
AACGAGCCAC CCATGCCCGG AAAAATCACG ACCGATCAGG CCATTGAGTT TGCCAAAGCC
CTTGTGCGCG GAGAGAAAGA CCGCAGTGAG ATCATAAAGA ATGTGATTAC CGATCAGTTT
AACGAAGCCG TAGCCACTAA AGGCCGCAGC TTGTTAAACG TGATTCCCGG TTTAGGTTAA
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| Protein sequence | MAKTGADLLV ERLLEWGVDT IFSLPGDGIN GIYESLRNRQ DKIKLIQVRH EEAAAFMACG
YAKFTGKLGV CLATSGCGGI HLLNGLYDAK YDSQPVLAIT GHTAHDVSGT FYQQDVDLVK
VFADVAAYNE RVMGPDHVVN VLDQAVRTSL GQRTVTHISF PKDYQEWTAS DDTRSQPNVP
NHSSATRVSH NVVPDTHELH RAAELINAGE KVVIFAGRGC LDARDEVLAL SDAVGGPIIK
ALLGKGVVPD TDPHTTGGLG LLGTAPSQDA MQECDTLIMI GTRFPYLEYF PKPGQARTVQ
IDIDPSHIGL RTPVEIGLLG SSKAVLQALL PLIKRKDDQS FLEKSQQRMT HWNELLTERA
TQDVMPMKPQ VVPHIISPLL NDDAIVTCDC GNNTTWAARH IQLRGTMQFS TSGLLATMAS
GLPYAIAASV AHPGKQVVAL VGDGGFTMLM GELATAVKYK LPIKVFIFHN NSYGQIKWEQ
IVMEGNPEFA VDLHSIDFAA YARACGATGF TIDDPKNADA IIRQAMAYEG PVVVDAIVDA
NEPPMPGKIT TDQAIEFAKA LVRGEKDRSE IIKNVITDQF NEAVATKGRS LLNVIPGLG
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