Gene Slin_6368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6368 
Symbol 
ID8730152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7716743 
End bp7717516 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content51% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003391125 
Protein GI284041195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.52551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA GCCAGTTCCT GAACCATTTT ATCGTGCGCA ACCTGCTGGG GTTGACGGGG 
CTGTTGCTGG CTCACTACCT GAGCGATCTG TATGCCATCG GTGAGCGGCC GGGATTTGCC
AGGCTATCGC CTTATCTCTA CCTGGTGCTT TTATATGGGT GGATCGTTTT TCACAACCGA
ATCCTGTTTG AGCGCCAGTT CCTGCAAGGT CGAAAAGCGG TTTACTTTGG ATGGCTTTTT
CTGCTTATGA CACTGGGCTC GTTCAACCTG AATTTCATTC TGCTGACCCA GTTTAATATA
TCCCGATCAT TGCCGTATCT GGTTAATTTT TGGGTGTACA CCGTTACCGG GCTGGGCGTT
TATGTCACGT ATCGCTTTCT AGGGGCGCGT CAGAAAGATG CCGGACAGCC AGTGCTGGTT
CCCCCGGTTG CCCGAGTAGA AACGGACTAT TTCTCGTGTA TGGTCGAGGG CGACCGGCAG
ATGATTCCGC ACGCCGATAT CCATTACATC GAAAGTTTAG AAAATTACCT GAAAGTCATT
ACCAAATCGA AAACGTACGT GACCCGCCTG ACCATGAAAG AAGCGGAGGA GCGTTTGCCG
AAACGGCAGT TTGTCCGTAT CAGCCGGTCG AATATTGTAA ACACGATGCA TGTAGACCGG
ATGGAAACAG ACACCATTTG GATCGGTCCG AAAGAGTTCC CCATCGGTAA AGTATACAAG
CGCTATGTCG CCGATCAGTT CCGGGGTGTG CGGGGGGACG GCAGTTATAG CTGA
 
Protein sequence
MKPSQFLNHF IVRNLLGLTG LLLAHYLSDL YAIGERPGFA RLSPYLYLVL LYGWIVFHNR 
ILFERQFLQG RKAVYFGWLF LLMTLGSFNL NFILLTQFNI SRSLPYLVNF WVYTVTGLGV
YVTYRFLGAR QKDAGQPVLV PPVARVETDY FSCMVEGDRQ MIPHADIHYI ESLENYLKVI
TKSKTYVTRL TMKEAEERLP KRQFVRISRS NIVNTMHVDR METDTIWIGP KEFPIGKVYK
RYVADQFRGV RGDGSYS