| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6359 |
|---|
| Symbol | |
|---|
| ID | 8730143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7709231 |
|---|
| End bp | 7711711 |
|---|
| Gene Length | 2481 bp |
|---|
| Protein Length | 826 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| Protein accession | YP_003391117 |
|---|
| Protein GI | 284041187 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTAG TCAAACGCGA TGGTCGCCGG GAGTCGGTTA AGTTCGACAA AATCACGGCC
CGGATCGAAA AGCTGTGCTA TGGTCTCGAT CCCGCTTATG TACAACCGGT AGAGGTGGCG
GTGAAAGTCG TTAGTGGTCT TTACGATGGC GTTAAAACCA CCGAACTCGA TAACCTGGCT
GCCGAAACAG CCGCGTCGAT GACCACCAAA CACCCGGACT ATGCCATTCT GGCGGCCCGG
ATCGCCATTT CGAACCTGCA TAAGGAAACG AATAAGTCGT TCTCCGGCAC CATCAAGAAA
CTGTATCAGT ACGAAGACCC AAAAACCGGC GAAAATGCAT CCCTGATCTC CAAAGAGGTG
TATGACGTGG TTCGTCAGCA TGCCGCCCTG CTGGACTCGA CCATCATTTA CGACCGGGAT
TATGGCTACG ATTACTTTGG CTACAAAACA CTAGAAAAAT CATATCTGCT GAAACTCGAC
GGCCGCATCG CCGAACGGCC ACAGCATATG CTGATGCGAG TAGCGGTTGG GATTCACCAG
GAAGATATCG AATCGGCCAT CGAGACGTAC AACCTGCTTT CGGAAAAGTG GTTCACACAC
GCCACCCCGA CGCTGTTCAA CGCTGGTACG CCAAAACCAC AGATGTCGAG CTGCTTCCTG
CTGACGATGA AGGACGACTC CATCGACGGT ATTTACGACA CGCTCAAACA AACGGCCAAA
ATCTCGCAGT CGGCGGGTGG TATCGGCCTG AGTATCCACA ACGTTCGGGC TACGGGTACC
TATATCAAAG GCACCAACGG AACATCGAAC GGCATTGTGC CGATGCTGCG CGTGTTTAAC
GACACCGCCC GCTATGTCGA TCAGGGCGGT GGCAAGCGTA AAGGCTCATT TGCGATTTAC
CTGGAACCCT GGCATGCCGA TATTTTCGAC TTCCTGGATC TGAAAAAGAA CTCGGGTAAA
GAGGAAGGCC GCGCCCGCGA CCTGTTCTAT GCCCTCTGGA CGCCCGATCT GTTCATGAAG
CGCGTGGAAG ATGACGACGT CTGGTCGTTG TTCTGCCCGC ACGAGTGCCC CGGTCTGGCC
GATTGCTACG GCGATGAGTT TGAAGAATTG TACACGCGTT ACGAGCGCGA AGGCCGTGCC
CGCCGGACGA TAAAGGCGCA GGAGCTGTGG TTCAAGATTC TGGAATCGCA GACCGAAACC
GGCACACCGT ACATGCTTTA TAAGGATGCC GCCAACAAGA AGTCGAACCA GAAAAACCTC
GGTACGATCA AGTCGAGTAA CCTGTGTACC GAAATCATCG AGTACACGGC TCCCGACGAG
ATTGCCGTTT GTAACCTGGC GTCTATCGCG CTGCCCAAGT TCATCACGCG CGGTACGGAT
GGCATTATGC GGTTCGATCA CCAGAAGTTG TATGAAGTGA CCAAAACGGC CACCCGCAAC
CTCAACAAGA TCATCGACAT CAACTATTAC CCGGTTGAAG AAGCCCGTCG GAGCAACATG
CGCCACCGGC CTATCGGTCT GGGTGTGCAA GGGCTGGCCG ATGCGTTCAT TATGCTTCGG
ATGCCGTTCG AATCGGAAGA AGCGCGTCGC CTGAACGAAG ATATTTTCGA GACGATCTAC
TTTGGTGCCA TGACCTCCTC GATGGAGCAG GCCAAAGAGT TCGGTCCGTA CGAAACTTGG
AAAGGTTCGC CGATTTCGCA GGGTATCTTC CAGTTCGATA TGTGGGGCGT AAAGCCCAAG
TCGAATCGCT GGGATTGGGA AAGCCTGCGT AAAGACGTGG TTGAACACGG TGTTCGGAAC
TCGCTGCTGC TGGCCCCCAT GCCAACGGCC TCGACCTCGC AGATTCTGGG CAACAACGAA
TGTTTCGAAC CGTACACGAG CAACATCTAC ACCCGTCGCG TACTGTCGGG CGAGTTCGTG
GTGGTGAACA AGCACCTACT CAAAGACCTG GTGAAACTGG GCTTGTGGAA CGATGCCATG
AAGAACAACC TGATTCTGGC TAACGGCTCG ATTCAGGCCA TCCCGAACAT TCCGCAGAAC
ATCAAAGACC TGTACAAAAC GGTTTGGGAG ATCAAGCAGA AGCACATCAT CGACATGGCC
GCCGACCGGG GTGCCTACAT TTGCCAGTCG CAGTCGCTGA ACATCCACAT TCAGGATTCG
AACTTCGGCA AACTAACGTC GATGCACTTC TACGCGTGGA AAGCGGGTTT GAAAACGGGT
ATGTATTACC TCCGCACGAA AGCCGCTGCC GACGCCGTGA AGTTCACGGT GGTACAGCCC
CAGGCCGAGC CACAACTGGA GCCGGTAATG GCCGAAGCGG TAACGGTAGA AAAACCCCTC
GATTACGTGC AATACGCCAA GGAACACGCC CAGAACGCAA CCCCGCAACC CGTACCGATG
GTAACGGACC TCGAACAGCA GTATGCCGCC ATGACCTGCT CGCTGGACGA TCCCGAAGGA
TGTGAGATGT GTGGATCGTA G
|
|---|
| Protein sequence | MFVVKRDGRR ESVKFDKITA RIEKLCYGLD PAYVQPVEVA VKVVSGLYDG VKTTELDNLA
AETAASMTTK HPDYAILAAR IAISNLHKET NKSFSGTIKK LYQYEDPKTG ENASLISKEV
YDVVRQHAAL LDSTIIYDRD YGYDYFGYKT LEKSYLLKLD GRIAERPQHM LMRVAVGIHQ
EDIESAIETY NLLSEKWFTH ATPTLFNAGT PKPQMSSCFL LTMKDDSIDG IYDTLKQTAK
ISQSAGGIGL SIHNVRATGT YIKGTNGTSN GIVPMLRVFN DTARYVDQGG GKRKGSFAIY
LEPWHADIFD FLDLKKNSGK EEGRARDLFY ALWTPDLFMK RVEDDDVWSL FCPHECPGLA
DCYGDEFEEL YTRYEREGRA RRTIKAQELW FKILESQTET GTPYMLYKDA ANKKSNQKNL
GTIKSSNLCT EIIEYTAPDE IAVCNLASIA LPKFITRGTD GIMRFDHQKL YEVTKTATRN
LNKIIDINYY PVEEARRSNM RHRPIGLGVQ GLADAFIMLR MPFESEEARR LNEDIFETIY
FGAMTSSMEQ AKEFGPYETW KGSPISQGIF QFDMWGVKPK SNRWDWESLR KDVVEHGVRN
SLLLAPMPTA STSQILGNNE CFEPYTSNIY TRRVLSGEFV VVNKHLLKDL VKLGLWNDAM
KNNLILANGS IQAIPNIPQN IKDLYKTVWE IKQKHIIDMA ADRGAYICQS QSLNIHIQDS
NFGKLTSMHF YAWKAGLKTG MYYLRTKAAA DAVKFTVVQP QAEPQLEPVM AEAVTVEKPL
DYVQYAKEHA QNATPQPVPM VTDLEQQYAA MTCSLDDPEG CEMCGS
|
|---|
| |