| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6347 |
|---|
| Symbol | |
|---|
| ID | 8730131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7698303 |
|---|
| End bp | 7699394 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_003391105 |
|---|
| Protein GI | 284041175 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAA AGCTTTTTTC GGCGGCTACG CTGGGTAATT TAACGTTACA GAATCACATT
GTCATGGCTC CCATGACCCG GAACCGCGCC ACGACAGATC ATGCCGTGAC CGACATTATG
ACCACCTATT ATGAACAGCG GGCATCGGCC GGTCTGATCA TCACGGAGGG CATTGCCCCC
TCGCCCAATG GAAACGGCTA CGCCCGTGTT CCGGGTATCT ACACAAAAGA CCAAATTGCG
GGATGGAAAA ACGTTACTGA TGCCGTTCAT GCCAAAGGCG GGAAAATTTT TGCACAGTTG
ATGCACAGCG GACGTGTTGG ACACCCCGTT AATATGCACG AGAATGGCGA AGTTATCGCA
CCGTCGGCCA TCGCTGCGGC CGGGCAGATC TACACCGATA CGGATGGTAT GCTCGACCAC
CCAATCCCAC GTGCCCTCAC AACGGACGAG GTAAAACAGA CGGTTCAGGA GTTTGTGCAG
TCGGCTAAAA ATGCCATCGA AGCCGGTTTC GACGGGGTTG AAATTCACGG CGCAAACGGC
TATCTGGTCG AGCAGTTTCT GCGGTCAACG ACCAACCAGC GTACTGATGA GTACGGTGGC
TCAGCCGAAA ACAATGCCCG CTTTGCTCTG GAAGTTGCCG AGCAAATTTC GGCCGCCATT
GGCAAAGAAA AGACCGGCAT CCGCCTGTCG CCTTACGGTG TGTTCAATGA CATGCCTTAC
TCACCGGACG ATGACAAAAT CTATCACTAC ATAGCCAAAA AGCTGTCGGA TTACGTCGTG
TACGTTCACC TGGTCGACCA TGAGTCGATG GGCGCACCAG CTGTTGATCC GGCGATTGTC
GAGGCTATTC GGGAAAATTA CAAAGGTGTG CTTATCCTCA GTGGTGGCTA CGATGCCGAG
CGGGCAGAAG CCGCTTTGAC GAGTGGAAAA GCCGATTTGA TCGCTATTGG TCGGCCATTT
ATTGCTAACC CCGATCTGGT CGAGCGTCTG AAAACGGGTG CTGAGCTGAA TCAACCCGAT
TTCTCAACTT TCTACACTCC CGGCGAAAAA GGGTATACTG ATTATCCGGT GCTGGAAGAA
GCAAGAGCGT AA
|
|---|
| Protein sequence | MAQKLFSAAT LGNLTLQNHI VMAPMTRNRA TTDHAVTDIM TTYYEQRASA GLIITEGIAP
SPNGNGYARV PGIYTKDQIA GWKNVTDAVH AKGGKIFAQL MHSGRVGHPV NMHENGEVIA
PSAIAAAGQI YTDTDGMLDH PIPRALTTDE VKQTVQEFVQ SAKNAIEAGF DGVEIHGANG
YLVEQFLRST TNQRTDEYGG SAENNARFAL EVAEQISAAI GKEKTGIRLS PYGVFNDMPY
SPDDDKIYHY IAKKLSDYVV YVHLVDHESM GAPAVDPAIV EAIRENYKGV LILSGGYDAE
RAEAALTSGK ADLIAIGRPF IANPDLVERL KTGAELNQPD FSTFYTPGEK GYTDYPVLEE
ARA
|
|---|
| |