Gene Slin_6330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6330 
Symbol 
ID8730114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7678127 
End bp7679263 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content52% 
IMG OID 
ProductNusB antitermination factor 
Protein accessionYP_003391088 
Protein GI284041158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.847383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGA TATATGCGCT TCGGCAGGCC GAATTTTCCA ATCAACAACT AGCCATCGAC 
GGCATCAATG ACCTCTTCCA ACCCGACCTG AACTCGATGT TGCCGCAGAA CAAGCGACAA
CTGGAAGGCT ACCGGAAACT GGCCGCTCTT CTTTTTGAAG AGGCCATCAA AGCCAATCAG
CCCGCTCAGG ACGAGGAAGC CCCCAAAAAT GTACTCAAAG CCGCCAACGA CGGTTTTTTA
TTCTACCAGA TCCGCGCCAA AAAAGACCGA CAGCACCTCG CACAGATGAT GCTGAAGCAG
GTAAATGGCA TCTACGACGG CTATCTGCTC GTGTTAACTT TGCTTGTCGA ACTCGGACAG
GTAGCCCAGA TTGACAGCGA ACGCCGGTAC CGCGATGTCG ACGAGATACC TTTTCCCTTT
GAATCGACGC TCTACGACAA CACCGTAATC AAGGCGCTGG CGCAGCACCA GCCGCTCCAG
AATGAAGCCG TCCGACACAA TATTTCATGG ACGGAAGACC TCGGTTTTGT TCGGAAAGCC
CTGCGCGAAG CCCTCAAAAC CGACGATACC TACCGGGCAT ACTGCTCAAC CCGAACCCAC
ACCGCCGACG AAGACCAGGC CCTGGCGCAA TACGTACTCC GCAGTCTGGT ATTCAAGCAT
GACGTAATTC GCGATCACCT GTCGGAGATT GACCTGAGCT GGGCCGAAAA CAGTGAAGTG
GTTCGTGGCC TCGCCATCCG GACGTTGAAA TCCGTCCAGA GTGCAACGGG TCTGCAACTC
GAACCGCTTA CCGACGACTG GGAGGAAGAC GAATTGTTCC TGAACACGCT GTTTGAGAAA
TCTATTGAAA ACGACGCTGA TTATGAGCAA CTCCTGGCCG ACCAGCTCAA AAACTGGGAC
GTTGAACGGG TGGCGATGAT CGACAAGATT ATCCTGAAAC TGGCTGTTTG CGAGTTACTC
AGTTTCCCAA ACATTCCGGT CAAGGTAACG ATTAATGAAT ATATCGAACT TGCGAAAGCG
TACAGTACGC CTAAAAGCGG TAAATTTGTG AATGGTATTC TGGATAACCT CTCCGAGAAG
CTACTGGCTT CGGGCCGTTT GCGTAAAAGC GGACGCGGGT TATTGGATAA TAAATAA
 
Protein sequence
MQAIYALRQA EFSNQQLAID GINDLFQPDL NSMLPQNKRQ LEGYRKLAAL LFEEAIKANQ 
PAQDEEAPKN VLKAANDGFL FYQIRAKKDR QHLAQMMLKQ VNGIYDGYLL VLTLLVELGQ
VAQIDSERRY RDVDEIPFPF ESTLYDNTVI KALAQHQPLQ NEAVRHNISW TEDLGFVRKA
LREALKTDDT YRAYCSTRTH TADEDQALAQ YVLRSLVFKH DVIRDHLSEI DLSWAENSEV
VRGLAIRTLK SVQSATGLQL EPLTDDWEED ELFLNTLFEK SIENDADYEQ LLADQLKNWD
VERVAMIDKI ILKLAVCELL SFPNIPVKVT INEYIELAKA YSTPKSGKFV NGILDNLSEK
LLASGRLRKS GRGLLDNK