Gene Slin_6323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6323 
Symbol 
ID8730107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7673095 
End bp7673664 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content54% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_003391081 
Protein GI284041151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT TATTGAGTAT AGTGACTTTT TTGGTAGTAG CCTATGGATG CGCCCCGCGT 
GTAACCGTCG ATAAAAACAC CCGGACCGAC TTTAGCAAGT ACAAGACGTT CGCCTGGATG
GACAGCGATG TAAAAGCGGG CCAGAATCCA TTGTATTATA ATCAAATAGC GACCGAAAGC
GTCGAAAACA CAATGGCTGA GGTATTACAA CAAAAGGGAT TGACCGAAAC AACGACGAAG
CCTGATTTGA TCGTTGGCTA CCATTTCTTT GTCGAAGACA AAACCCGGAA TGTCGCCACA
CCCTCGCCTT ACTACGGTCC TTATATGGGT TGGGGCCGTT GGGGCTACGG TGGCTGGGGA
CCCGGTTGGT GGGGATGGGG CGGCCAACAA TACCAGCAGC AGCAGTATCA GGCCGGTACG
CTGGTGGTAG ACATGGTCGA TGCCCGCACG CGTAAGCTCG TCTGGCGAGG TTCAGTGCAG
AACGCCGTTG GTGACCCCGC CCGCATTGCG GCCCAGTTGC GCAAAGAAGC CGAACGCATC
GTGGAGAAAT TTCCCGAGCG CACAAGCTAG
 
Protein sequence
MKRLLSIVTF LVVAYGCAPR VTVDKNTRTD FSKYKTFAWM DSDVKAGQNP LYYNQIATES 
VENTMAEVLQ QKGLTETTTK PDLIVGYHFF VEDKTRNVAT PSPYYGPYMG WGRWGYGGWG
PGWWGWGGQQ YQQQQYQAGT LVVDMVDART RKLVWRGSVQ NAVGDPARIA AQLRKEAERI
VEKFPERTS