Gene Slin_6312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6312 
Symbol 
ID8730096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7663269 
End bp7663757 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003391070 
Protein GI284041140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCG CGCCGGAGTT CATTAACCTC ATCCGACAGC ATCAGAAGAT TATCCACAAG 
GTCTGCCACC TATATATTGA CAACCCCACC GACCGCGAAG ACCTCTTTCA GGAGATTCTG
CTGAACGCGT GGAAGTCGTG GCCAATGTTT CGAAATGACG CCCGCTTCAC GACCTGGCTG
TACCAGGTCG CGCTCAACAC GGCTATTTCC TACTTCCGCA AGGAGAAGAA GAAACCCGTT
CAGCAGATTC TGGACGGCGA ACTGGCCCTC GCCGATGCCC CGGACGACGA TAGCGAGCAG
CAATTCAGGG CGATGTACCT GGCCATCGCC GATCTTAACA AAATTGACAA GGCCGTTATC
ATGCTTTACC TGGAGCAGTA CGATTATAAA ACAATCGGTC AGATGCTGGG CATGACCGAC
AACAACGTAG CCGTTCGCAT GAACCGCATC AAAACTTTTC TGAAAGAAGC TGTTAAGAAA
CACCTGTAA
 
Protein sequence
MSSAPEFINL IRQHQKIIHK VCHLYIDNPT DREDLFQEIL LNAWKSWPMF RNDARFTTWL 
YQVALNTAIS YFRKEKKKPV QQILDGELAL ADAPDDDSEQ QFRAMYLAIA DLNKIDKAVI
MLYLEQYDYK TIGQMLGMTD NNVAVRMNRI KTFLKEAVKK HL