Gene Slin_6310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6310 
Symbol 
ID8730094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7661452 
End bp7662624 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391068 
Protein GI284041138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.524025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AAAAGCGTGC CCTTATTCAG ATAATACTGG GTAGTCTTGT TGGGGGAGCC 
GTTGGCTTCG GTATAGGAAA ATTTGCCTTT CAACTTTTCC CAAAAGACTT ACTAAAACAT
GTTCTACAAT CGTCGGCAGG GCCTGCTGAA ACGGCGGCCA AGATACTACT GTCCCTGGTA
GCCCTCTGGG CGGCACTGGC CATTCATGAG TTAGGCCATT TACTGACCGG TGTGGTGCAG
GGATTTCGGT TTCACCTCTA CGTGGCAGGT TTTCTGGGAA TTCGGCGAAA CCCACAATCA
GACCGCGTTG AATGGTATCT GAACCGCGAT GCCCAGCTTT TTGGCGGGGT AGCGGCCACC
CTGCCCACGC AGCAAACGAC CGACCTGCGC CAGCGCTTCG CCTGGGTTGT GCTGGCCGGA
CCACTAACCA GCCTGTTAAC CGGCGCACTT GTCCTGTGGC TAACCTACAT GGGAATCGGT
AATCCGGCAG TGTCTACCTC TGTCTTACTA CGTTGTAGCC TGATTTTCGG CCTTGTCTTT
TCCATGACGT CACTCGCATT ATTTTTAGCA ACTACGGTTC CCAACCGAAC GGGCGTTTTC
TATACGGATC GGGCGCGTTT TTTCCGGCTC ATTCGGGGTG GGCATACAGG GCAGGTCGAG
CAGGCCGTTC TGGAGACGCT GGCCCATTCT ATGTCGGGAC GGCCTTACGG AGAGCTGGAT
AGTGAGCAGC TTGATTTGCT CCTTACGGAG AAAGAGACTT TTTTTCAAAC CTATGCCCAT
ACCCTTGCCT ATTATCGCCA TCTGGACCGG AATGAGCTGG CGGAGGCTTA CCGGCATATC
TGCACCGCCG ATGAGCTGGC CCATGAGCAA CCCCGGCTTT TCAGGCAGGA AATCTGGAAA
GAACTGGCAT TTGCTCATGC TTATATAGGG CACGACGCCG TACAGGCCCG GCAAGTCTGG
CAGCAGATTA AACCAGACCC GGAAACAAAA CCATCTGCAC AAACCTACCT TACAAAGGCG
GCTATCGCCG TTGCAGAATT AACTTCGGCA ACGGCTTTGC AAGACATTCA GCAGGGAATT
TCGCTGTTGC CGACACCCAT TTATAAGGCA GAAGACCGCT TATATGCGCA GTTGCTGAAC
CAACTTGCAC AGACCGCAAA ACAGCCCATT TAA
 
Protein sequence
MEKKKRALIQ IILGSLVGGA VGFGIGKFAF QLFPKDLLKH VLQSSAGPAE TAAKILLSLV 
ALWAALAIHE LGHLLTGVVQ GFRFHLYVAG FLGIRRNPQS DRVEWYLNRD AQLFGGVAAT
LPTQQTTDLR QRFAWVVLAG PLTSLLTGAL VLWLTYMGIG NPAVSTSVLL RCSLIFGLVF
SMTSLALFLA TTVPNRTGVF YTDRARFFRL IRGGHTGQVE QAVLETLAHS MSGRPYGELD
SEQLDLLLTE KETFFQTYAH TLAYYRHLDR NELAEAYRHI CTADELAHEQ PRLFRQEIWK
ELAFAHAYIG HDAVQARQVW QQIKPDPETK PSAQTYLTKA AIAVAELTSA TALQDIQQGI
SLLPTPIYKA EDRLYAQLLN QLAQTAKQPI