Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6307 |
Symbol | |
ID | 8730091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7656441 |
End bp | 7658759 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | capsular exopolysaccharide family |
Protein accession | YP_003391065 |
Protein GI | 284041135 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.6836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA ATCAGTATAC TAATTCGACG CCAAATAAGC CCGTAAATAT ACGCTTATTT TTTTCGAAGT ATTTACGCAA CTGGTACTGG TTTGTTATTG CTTTGGTAGC TGCCTTAGGT GGTGCCTATT ATTACCTTCG GAATACGACA CCGGTTTATC AAGTCAACGC AGCCATTCTT ATCAAAAAAG AAGAGAAAGG TATGATTGGC GACGATATTA TAAAGAGTGA AAATACGAAG GTAAGCGAGA AAAATATCGA GAACGAAATT GAAACATTAA AGTCACGCAC ATTAATTCAG CGAGTGGTCG ATGATTTGAA TTTGACCGTT GGTTATTTTC AAAAAGGAGA CGTTCGGGAC AATGAAGAAA TTTATGACGA ATCGCCTATT CATGTTCGGC CCATTAAATT AAATGCGGCT GCTTATGCTG GTCTTATTTC GGTTCATATT TTAAATCCAA AGCAGTACGA ATTACTGGAT GAGGAAGGCA AAACCAAGGG CAAATACAGT TTTAATCAGC TGGCAAAAAG CGATTATGGT ACGTTTAACA TAACGTATAT CGATTCGCTG TACAACCCCG CAAAAAATGT AATCAAGGTT GCATTTTATG ACAAAGAAGT AACAGTTCAG CAGTATCAAT CAGCCGTTAA AGTAGAACTG AACAACCAGA AGAGCACGGT ACTGAAATTG GGTATGGAAA CGCCCGTACC ATCGAAGGGG AAAGCGGTTT TGGGCAAATT GATGGACGAA TACACTTTTG CGGCTCTGGC CGATAAAAAC AAGGAAGCGG CCAATACCAT GCAGTTTATC GATGAGCGCC TGCGCCTGAT TACCGGTGAA CTGGGTAACG TCGAAAAAAA TGTTGAATCG TACAAAAGTC AGGCCGGCAT AACCGATTTA AGCACCGAAG GAAACCTGTT TCTGGAATCG GTAAAGGACA ACGACGCCAA ACTGAATGAT GTTGAAATTC AGCTCAGGGT ATTGAACGGG GTTGAATCGT ATTTAAAGAA TAGCCAGAAC GGCGTGGCAC CCGCTACGGC CATGGGCAAC GATGCGGTAC TGGGTGGTCT GTTAAAGAAA CTCAGCGACC TGGGTTCGCA GGAAGAGAAA TATAGCCGGA CAACGCAGCC AGATAACCCT TACCGGCAAA CAATTGAAGC ACAAATTGCC AGCACGAAAG CCTCTATCCG GGACTACGTT AATAACCAGC GGCAGAATTT GCTTGTAACG CAAAGCAGCC TGAAACAACA GAATGGCCGT TTTAACTCGT CTATCCGAAC CATTCCCCGC AAGGAGCGCG AGTTTGTAAA CATCAAGCGC CAGCAGGCCA TTAAAGAAAA TCTGTACCTT CTGCTGCTCC AGAAAAAAGA GGAAACCGCC ATTGCCCACG CGCCCACGAT TACAGACAGC CGGGTTATGG ATGCACCTTA CAGCTCTCCG GGTCCCGTTA AGCCAAACCA CAGCAGCATT TACATGCTGG CCGTTTTTGC TGGCTTGCTG ATTCCGGCCG GGTTTATCAG CGCCCGTGGC CTGATGAACG ACAAAGTGCA GTCGCGGAAA GAGATCGAAG AAGAAACGGG GGTTGTCGTG TTCGGCGAAA TCACCAAAAA ACCAAAGCAG CTTAAGAACA ACATCGTCGA TCTGACCAGC CATTCGCTCA TTGCCGAGCA GTTCAAAATT CTGCGGGCCA ATTTGCAGTA TGCCGGCCGG GAAGACGGTA ACCCTGACGG GCAGGTGATT CTGATCACCT CATCGGTTAG TGGTGAAGGC AAGAGTTTTG TGAGCATCAA CATGGCGCTG AGCCTCGCAT TGCTCAACAA AAAGGTGATC GTGCTGGAAC TGGACCTGCG TAAGCCTCAA ACGGCTCAAT ACCTGAACAT GACTCAGCTC GACAAGCCGG GTATTTCCAG CTACCTGGAT GGCCGGATCG GATACGATCA GTTAATTCAG CAAACGCAGG TTCACCCCAA TCTGTATTTC ATAGCAAGCG GCCCGATTCC CAATAACCCA ACGGAGCTGC TGTCGAACGG ACGTATTCAG GTGTTGCTCG ACCAGCTGCG AAGCGAGTTC GATTACATTG TTCTGGATAC GCCCCCGGTA AGTATGCTGG CCGATGCCAC GCTGCTGGGA CCCTACGCGG ATACCGCTTT TTACGTTGTC CGCCACGAGT ACACGCCACG CAATTACATG CGTTTGCTGT CCAATTTAAA CGACAGCCAC AAGTTCAAAT CGCTGAACGT CATTGTCAAC GCCGTCAACT ATCCCAACAG TGAGGATTTC GGCTATGGGT ATAGCTACCC GAAGCGCAAA GCGTACTAA
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Protein sequence | MIDNQYTNST PNKPVNIRLF FSKYLRNWYW FVIALVAALG GAYYYLRNTT PVYQVNAAIL IKKEEKGMIG DDIIKSENTK VSEKNIENEI ETLKSRTLIQ RVVDDLNLTV GYFQKGDVRD NEEIYDESPI HVRPIKLNAA AYAGLISVHI LNPKQYELLD EEGKTKGKYS FNQLAKSDYG TFNITYIDSL YNPAKNVIKV AFYDKEVTVQ QYQSAVKVEL NNQKSTVLKL GMETPVPSKG KAVLGKLMDE YTFAALADKN KEAANTMQFI DERLRLITGE LGNVEKNVES YKSQAGITDL STEGNLFLES VKDNDAKLND VEIQLRVLNG VESYLKNSQN GVAPATAMGN DAVLGGLLKK LSDLGSQEEK YSRTTQPDNP YRQTIEAQIA STKASIRDYV NNQRQNLLVT QSSLKQQNGR FNSSIRTIPR KEREFVNIKR QQAIKENLYL LLLQKKEETA IAHAPTITDS RVMDAPYSSP GPVKPNHSSI YMLAVFAGLL IPAGFISARG LMNDKVQSRK EIEEETGVVV FGEITKKPKQ LKNNIVDLTS HSLIAEQFKI LRANLQYAGR EDGNPDGQVI LITSSVSGEG KSFVSINMAL SLALLNKKVI VLELDLRKPQ TAQYLNMTQL DKPGISSYLD GRIGYDQLIQ QTQVHPNLYF IASGPIPNNP TELLSNGRIQ VLLDQLRSEF DYIVLDTPPV SMLADATLLG PYADTAFYVV RHEYTPRNYM RLLSNLNDSH KFKSLNVIVN AVNYPNSEDF GYGYSYPKRK AY
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