Gene Slin_6300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6300 
Symbol 
ID8730084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7648346 
End bp7649650 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391058 
Protein GI284041128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.546717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC AGATGGAGGC CAACCGCTGG CTCAAGCGAG GTATCTGGCT TTATTTCTGG 
CTGCTCATTC TGGAGGGCGC TCTACGTAAG TGGGTCTTGC CGGGTCTGGC AACGCCTTTG
CTCGTGGTGC GTGACCCAAT CGCTCTCCTG CTGATTATCG GTGCCTGGCG AAACGGCCAG
CTGCGCATAA ACGGCTACAT GCTCGGGATG GTGTTCATTG GCCTGGTGGG TATCTATACC
GCTATTTTTC TGGGCCACGG CAACCTGACG GTGGCCTTGT TCGGTGCCCG TATCGTGCTG
TTCCATTTCC CGCTGATGTT CGTGATCGGG GCCATTTTTG AGCGCGAGGA CGTAATCAAA
CTGGGTAAGA TGACCGTTCT GATTTCGGTG TTCATGTCGA TTCTGATCGC CATTCAGTTC
TACAGCCCGC AGTCGGCCTT TGTGAACCGG GGCGTTGGGG GCGACATGGC GGGGGCCGGT
TTCGATGGCG CTATGGGCTA TTTCCGGCCA CCGGGCACCT TTTCATTCAC CAACGGCCTT
CACCTCTTTT TCGGGTTTGC GGGTATTTTC ATCTTTTACT TCTGGGTCAA TGCCGAGGGC
ATCAACCGGC TGGTTCTGCT CGCGGCTACG GCAGGTGTAG CGGCTGCCAT ACCGTTCTCC
ATCAGTCGAA GCCTGCTGCT GTTCGTCGCC ATCGACTTCG GGTTTGTGGC CATCGCCGTG
CTGCGCAAGC CTCAATACGC CGGACGCCTG ATTATGCTGG TTGTCGGTGC CCTGATTGCC
GTGGCAATCT TGAGCCAGCT CCCTGTTTTG CAGGCGCCCA TCGAAGCGTT CGTTTCCCGA
TTCACCAGCG CCAGTGATGT GGAGGGCGGT CTTAAAGGCT CCCTGGGCGA CCGGTGGCTG
GGTGGACTTA CCGGTGCCCT GAACGACTCG TTCGATCAGC CATTCTGGGG ATACGGACAG
GGTATGGGAA CCAATGCAGG CAGCACACTG CTGACGGGTG GTTCACGGGC TTTCCTGATC
TCGGAAGGCG AATGGGGCCG GGTCATCGGC GAATTAGGCC CTTTACTCGG ACTTTCCCTG
ATTCTGATAC GGGTCAGCAT CAGCCTTGAG TTCCTAGTGA TCGGTTACAA ACGACTGATT
GCGGGTGATT TTCTGCCCTG GGTGCTGATC GGTTATATCC TGATGATGGT ACCCCAGGCG
CAGTGGGCGC AACCAACGGC CCTGGGCTTT AGTACGATGA TTGGCGGACT TTTTCTGGCT
TCCCTGCATC GATCCCGATC AGAAGCATCT GGCAACACAC GATAA
 
Protein sequence
MPEQMEANRW LKRGIWLYFW LLILEGALRK WVLPGLATPL LVVRDPIALL LIIGAWRNGQ 
LRINGYMLGM VFIGLVGIYT AIFLGHGNLT VALFGARIVL FHFPLMFVIG AIFEREDVIK
LGKMTVLISV FMSILIAIQF YSPQSAFVNR GVGGDMAGAG FDGAMGYFRP PGTFSFTNGL
HLFFGFAGIF IFYFWVNAEG INRLVLLAAT AGVAAAIPFS ISRSLLLFVA IDFGFVAIAV
LRKPQYAGRL IMLVVGALIA VAILSQLPVL QAPIEAFVSR FTSASDVEGG LKGSLGDRWL
GGLTGALNDS FDQPFWGYGQ GMGTNAGSTL LTGGSRAFLI SEGEWGRVIG ELGPLLGLSL
ILIRVSISLE FLVIGYKRLI AGDFLPWVLI GYILMMVPQA QWAQPTALGF STMIGGLFLA
SLHRSRSEAS GNTR