Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6251 |
Symbol | |
ID | 8730034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7582394 |
End bp | 7583779 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | MATE efflux family protein |
Protein accession | YP_003391009 |
Protein GI | 284041079 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAT TCTTTCGGTT ATTCCTGGCC GCATTGCGCG GTACAGAAAC CAATTTTACA ACCGGCAGCA TCAATCGGGC TATCTTCCTG CTATCCGTTC CCATGATTCT GGAAATGGTG ATGGAGTCGC TGTTTGCCGT TGTCGACGTC TTTTTTGTCG CCAAAATCGG TACGGAAGCC ATCGCTACGG TAGGGCTTAC CGAGTCGGTG CTGACCATCG TTTATTCCAT TGCCATTGGT CTCAGTACAG CCGCCACGGC GCTGGTATCC CGGCGGGTAG GGGAGAACAA TCCGCGCGGA GCCGGTACGG CGGTGGGGCA GGTGATGCTG GTATCCCTGA CGATGGGGGT TCTGATGGGC GGAGCCGGCT TTTTCTTTGC CGAAAACATC CTGCGGCTGA TGGGGGGCGA AACGCGGCTC ATCGCCAACG GCGTTGGGTT TACCCGCATG ATTTTTGCCA GCGCTCCGGC CATTGTACTG CTCTATACAC TGAGCGGCTG CTTGCGCGGG TCGGGCGATG CATCCGTTGC CATGCGGTCG CTGTGGCTGG CCAACGGGGT AAACATCGTG CTCTGTCCGG TCTTTATCTT CGGGCTGGGA CCCGTTCCGG AATTGGGGGT AATGGGTTCG GCGGTGGCAA CGACCATTGG CCGGACTGTG GGCGTACTGT ACCAGCTCTA CGCCCTGACG CGGGTAAAAG GCGTTATTCA GGTGTTACGG GCCGATATGG CACCCGACAC GGGCATTATT CGTAACCTGC TGAGCATAGC TGTTGGAGGG ACCAGCCAGT TTCTGGTCGG GTCGGCCAGC TGGATTTTCC TGACTCGTAT CCTCTCTACG TTCGGGAGTG ATGTTGTGGC CGGGTATACC ATTGCCATCC GCATCATTGT ATTTACGATT CTGCCCTCGT GGGGACTGGC CAATGCCGCT GCCACCCTGG TGGGACAAAA TCTGGGGGCC GGTCAGCCCG AACGTGCCGA AACGTCGGCC TGGCGGGCGG CTTTCTGCAA CATGCTCTTT CTGGCGGCCG TTGGTGTAGG TTTTTTTCTG GCCGCAACAC CCATTGTCGG TCTGTTCGAC AATAACGTTC GCGTGGTCGA GGTAGCCGTC GAGTGTTTGC GGGTATTTTG CCTGGGTTAC CTATTCATGG CCTACGGCAT GGTACTCAGC CAGTCGCTCA ACGGGGCTGG CGACACCCGC ACGCCTACCC TTATTAACAT CGTGTGTTTC TGGGTCGTTG AAATTCCGCT GGCCTACATA CTGGCGCATA CCCTGAACTG GGGGCCTCCG GGGGTATTCT GGTCGGTGGC TATTAGCGAA ACGCTGCTGG CGGGTGTGGC GATCTGGGTG TTCCGCCAGG GGCGCTGGAA AACCGTAAAG GTTTAG
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Protein sequence | MTKFFRLFLA ALRGTETNFT TGSINRAIFL LSVPMILEMV MESLFAVVDV FFVAKIGTEA IATVGLTESV LTIVYSIAIG LSTAATALVS RRVGENNPRG AGTAVGQVML VSLTMGVLMG GAGFFFAENI LRLMGGETRL IANGVGFTRM IFASAPAIVL LYTLSGCLRG SGDASVAMRS LWLANGVNIV LCPVFIFGLG PVPELGVMGS AVATTIGRTV GVLYQLYALT RVKGVIQVLR ADMAPDTGII RNLLSIAVGG TSQFLVGSAS WIFLTRILST FGSDVVAGYT IAIRIIVFTI LPSWGLANAA ATLVGQNLGA GQPERAETSA WRAAFCNMLF LAAVGVGFFL AATPIVGLFD NNVRVVEVAV ECLRVFCLGY LFMAYGMVLS QSLNGAGDTR TPTLINIVCF WVVEIPLAYI LAHTLNWGPP GVFWSVAISE TLLAGVAIWV FRQGRWKTVK V
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