Gene Slin_6242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6242 
Symbol 
ID8730025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7571246 
End bp7573522 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content56% 
IMG OID 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 
Protein accessionYP_003391000 
Protein GI284041070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA CTAAATCTAG CTATAACAGG CGTTCCTTTC TAAAGGCTTC GCTGCTATCG 
GGCGGTGGTA TGATGCTCAG CGTGAGCTGG CTGTCGAGCT TTGCCGCTTC CGATAAAATG
CAGGCGCTGA ACCTGCCTGA ACAATGGGCG CAACTCAACG GCTATATCCA GATTACGCCC
GATAATGTCA TCAGGCTCAT GTGCCCAAAT CCCGAGTTTG GCCAGAACGT GATGACCTCG
CTGCCCATGA TTGTTGCCGA AGAGCTGGAC ATAGACTGGA AAAACGTGGT GGTCGAGATG
GCCCCGCACG ATAACACCAA GTTTGGCGGG CAGTTCACCG GCGGTAGCCA ATCGGTGCGG
GCTTACTGGA AACCCCTGCG AACGGCCGGT GCGTCGGCCC GGCAGATGCT TCGCGAAGCG
GCCGCGAAAA GCTGGAACGT ACCCGTCGAT GAGGTGAGCA CCAAAGCGGG TGTACTCTAC
CACGAAAAGT CGGGTAAATC GGCCAAATAC GGCGAGTTAG CTTCAAAAGC CGCCGAAATA
CCGGTGCCTA AAGACATAAA GCTTAAAAGC CCGAAGGACT TCACCATTGT CCGTAGTGGC
CGGAAAAACG TTGAGGGGCT CAAGGTCGTA ACCGGTAAGC CGCTGTTTGG GCTGGATTAC
CGGCAACCGG GTACGCTGAT TGCCATGATC CAGCACCCAC CGGCGTTCGG CCTGAAGCTG
AAATCGTTCG ATGCCACGCA GACGCTCAAA ATGCCGGGCA TAACCGACGT GTTTGCAATC
GATGTGTTTG AACAGGGTTC GGAACGGGGG GCGTTTGAAA CCCGAACCTT CAATGAACTG
GTGGTGGTGG TAGGCAAAAC GACCTGGGAG GTCATGAATG CCCGCAAAAA ACTGAAAGTA
CAGTGGGAAC AGGCTCCTGA GCGCAAAGAA GCGACCAATG CCTTCGGCCG GAAAGGTGAA
GAGATAACCC CCGCCGGTCT GGAAAGCACC ACCGCTCAAC TAGCCCGAAT GCAGGAATGG
GCGAAAAAAC CGGCAACCCA ACTCCGCAAA GACGGCGACC CGGAAACAGC CTTCAGGAAT
GCGGCTCAGG TCATCGAGCG TACCTACAAT GCGCCTTTTC TGGCCCATAA CTGCATGGAG
CCAATGAACT TCTTTGCCCA TGTGACCGAC GAAAAAGCCT TTGTAGCAGG CCCCATTCAG
GCTCCGTCCT TAACCGAACA AACACTGTCG AAGCGACTGG GCTTGCCTGC CGATAAGATT
GATATTCAGA TGACACGCAT GGGTGGCGGA TTTGGTCGGC GGGCCTATCA TCACTACGTA
GTGGAAGCGG CCCTGATCTC GAAAAAGGTC AAAGCCCCCA TTAAGCTGAT CTACACCCGC
GAAGATGACA TGACCTACGG TATCTACCGT CCCATGTACA CGGCTACGTA CCGCGCAGCA
CTGGACGCCA ACAAAAATCT GATTGCCTTT CATGTGAAAG GGGGCGGCAT TCCCGAGCAT
CCGGTTCATG CCAACCGATT CCCGGCCGGA GCGGTAGACA ACTACCTGGC CGAAGGCTGG
GAGATTCCAT CCAACATCAC GATTGGGGCT TTCCGGGCTC CACGCTCCAA CTTCAACGCT
GCCGCCGAGC AGTCATTTCT CGACGAAGTG GCCGAAGCAA TGGGCAAAGA CCCCATCGAG
TTCAGGCTGG AGCTGCTGAA ACGGGCGAAG GAAAATCCGG TCGGCAAGAA CAACGAGTAT
GACCCCGACC GGTATGCGGG TGTGCTGACG CTGGTACGCG ACAAATCCGG ATGGAGCAAG
GCGGGCGTCG CCACGTCCGG CAACGAGAAG TACAACCGGG GCGTGGCCGC TTATTTCTGC
CATAACTCCT ACGCGGCCCA CGTGGTCGAT ATGGTGACCC GCGATGGACA GCCGTATGTC
GAGCGTGTAT TCAGTGCAAT GGACTGCGGG ATCGTGGTAA ACCCCGAATC GGCGAAAAAT
ATGGTGCAGG GTGCCGTGGT CGATGGTATC GGCAACGCAT TTTACGGTGC TTTAACGCAT
AAAGACGGCG CGGCCGAGCA GTCGAACTTC CACAACTACC GCATCATTCG GCACAACGAA
GCGCCCAAAC AAATTGAGGT TTACTTCGTC GAAAACGACA TCGATCCAAC CGGCTTGGGC
GAGCCTCCTT TCCCGCCCGT GTTTGGTGCG GTGGCCAACG CGCTGTACAA AAACCAGGGC
AAACGATTCT ACAACCAGCC CTTTCAGCCA GAACTGGAGA AACGGATTTC AGGATAA
 
Protein sequence
MKTTKSSYNR RSFLKASLLS GGGMMLSVSW LSSFAASDKM QALNLPEQWA QLNGYIQITP 
DNVIRLMCPN PEFGQNVMTS LPMIVAEELD IDWKNVVVEM APHDNTKFGG QFTGGSQSVR
AYWKPLRTAG ASARQMLREA AAKSWNVPVD EVSTKAGVLY HEKSGKSAKY GELASKAAEI
PVPKDIKLKS PKDFTIVRSG RKNVEGLKVV TGKPLFGLDY RQPGTLIAMI QHPPAFGLKL
KSFDATQTLK MPGITDVFAI DVFEQGSERG AFETRTFNEL VVVVGKTTWE VMNARKKLKV
QWEQAPERKE ATNAFGRKGE EITPAGLEST TAQLARMQEW AKKPATQLRK DGDPETAFRN
AAQVIERTYN APFLAHNCME PMNFFAHVTD EKAFVAGPIQ APSLTEQTLS KRLGLPADKI
DIQMTRMGGG FGRRAYHHYV VEAALISKKV KAPIKLIYTR EDDMTYGIYR PMYTATYRAA
LDANKNLIAF HVKGGGIPEH PVHANRFPAG AVDNYLAEGW EIPSNITIGA FRAPRSNFNA
AAEQSFLDEV AEAMGKDPIE FRLELLKRAK ENPVGKNNEY DPDRYAGVLT LVRDKSGWSK
AGVATSGNEK YNRGVAAYFC HNSYAAHVVD MVTRDGQPYV ERVFSAMDCG IVVNPESAKN
MVQGAVVDGI GNAFYGALTH KDGAAEQSNF HNYRIIRHNE APKQIEVYFV ENDIDPTGLG
EPPFPPVFGA VANALYKNQG KRFYNQPFQP ELEKRISG