| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6239 |
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| Symbol | |
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| ID | 8730022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7565055 |
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| End bp | 7567931 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_003390997 |
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| Protein GI | 284041067 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAA ACTCCAACAT TCGTTCCGTT CTGATCATTG GCTCAGGTCC TATTGTGATC
GGCCAGGCTT GTGAATTTGA TTACGCCGGT TCGCAGGCTG CCCGTTCCAT CCGCGACGAA
GGCATCGAAG TATCGTTGAT CAACTCCAAT CCGGCCACGA TCATGACCGA CCCGATCAAC
GCCGATTATG TGTACCTGTT GCCGCTGGAG AAGAAGTCCA TTGTTGAGAT CCTGAAAAAA
CACCAGGAGA TGGGCAAGCC CATTGATGCA GTATTGCCTA CAATGGGTGG ACAAACGGCA
TTGAACCTGG CCATCGACTG CGATAAGGCG GGTATCTGGA AAAAATACGA TGTTCAGATT
ATCGGGGTCG ACATCAAAGC CATCGAAACG ACCGAAGACC GGGAGAAATT CCGGCTGCTG
ATGCTGCAAC TGGGTGCGGG CGTTTGTAAA GGCCGCACGG CCCGCTCCTT CCTGGAAGGG
AAAGAAATTG CGCAGGAAAT TGGCTTCCCG CTCGTGATCC GGCCGTCGTT TACGCTCGGC
GGAACGGGGG GCGGCTTCGT CAATCGCCCC GAAGATTTCG ACAAGGCACT CACCGCCGGT
TTGCACGCAT CGCCCGTGCA TGAGGTGCTG GTCGAACAAA GTGTGATGGG CTGGAAAGAA
TATGAGTTGG AGCTGCTTCG CGATAACAAC GGTAACTTCG TTATCATCTG CTCCATCGAG
AACTTCGACC CGATGGGTAT TCATACCGGC GACAGCATCA CCGTTGCCCC GGCCATGACC
CTGCCCGATA CGCTGTACCA GAAAATGCGC GATCTTGCCA TCACGGTTAT GGGTGGTATC
GGGCAGTTTG CTGGTGGCTG TAACATCCAG TTCTCGGTTA ATCCGCAAAC GGACGACATC
ATCGTTATTG AGGTAAACCC ACGGGTAAGC CGGTCGTCGG CGCTGGCTTC CAAAGCAACG
GGCTACCCCA TTGCCAAGAT TGCCGCTAAA ATGGCCATCG GCTATAACCT CGACGAGCTG
ATGAACCCCA TTACGGGAAC GACCTCGGCC TTTTTCGAGC CCGCCATCGA CTACGTGATC
GTGAAAGTAC CGCGCTGGAA CTTCGACAAG TTTCCGGGTG CCGACCGCTC GCTGGGCCTG
CAAATGAAAT CCGTTGGCGA AACAATGGGC ATTGGCCGGA ACTTCCAGGA AGCATTGCAG
AAAGCCTGTC AGTCGCTCGA AATCCGGCGC AACGGGCTTG GTGCCGACGG TCACGAACTC
ACCGACCGCA ATGCCCTGAC CGAAAGTCTG CAACACCCAA GCTGGAACCG CCTGTTCCAT
ATCTACGATG CCTTTAAGGC GGGTATGTCG TTCCGGACCA TTCAGCAGCT AACCAAAATT
GACCCCTGGT TCCTGCACCA GATCGAAGAA CTGATCGAGC TGGAGCGCGA AATTCAGCAG
TACGATCTGG ACGATATTCC GCCCGAACTG CTTCGTATTG CCAAGCAGAA AGGCTATGCC
GACCGGCAGT TGGCGCACCT GTTGCAGGTA AAAGAAAGTA AAATCTACCA ATACCGCCAG
GCGCACAACA TCCGCCGGGT GTATAAGTGC GTGGACACCT GCGCGGCCGA ATTTGAAGCC
AAAACGCCGT ACTATTACTC GACGTTCAAC AACCAGGTGC CCATCACGAC GGATCATGCC
GAACCGGTTT CTGACCTGCC CGGCAACGAG TCGATCCGCA GCAACCGCAA GAAGATCGTC
GTACTGGGTT CCGGTCCGAA CCGCATCGGT CAGGGCATCG AGTTCGACTA TTCCTGCGTA
CACGGTGTGT TGGCGGCCAA AGAGGCCGGG TACGAAACCA TCATGATTAA CTGTAATCCG
GAGACCGTTT CGACCGACCC CGATATTGCT GATAAGCTGT ACTTCGAACC GGTTTTCTGG
GAGCACGTTC ACGCCATCAT CATGCACGAG CAGCCGGAAG GTGTTATTGT GCAGCTGGGT
GGGCAAACGG CCCTGAAAAT GGCCGAGAAA CTGACGCGCT ACGGTATCAA AATCATCGGA
ACCAGTTGGG AAGCTCTCGA CCTGGCCGAA GACCGGGGTC AGTTTTCGAG CCTGCTGCGC
GATTTGGAGA TTCCGTACCC GAAATTCGGA ACGGTGCGCG AGTCGGAAGG GGCGCTGGAA
CTCTCCCGTG AGTTAGGTTT CCCGCTGCTG GTTCGCCCAA GCTACGTGCT GGGTGGTCAG
AACATGAAAA TCGTGATCAA CGAGAACGAG CTGGAACAGC ACGTGATGAA GATCCTTCAG
GATATTCCGG ACAACAACAT TCTGCTCGAC CACTTCCTCG AAAACGCCAT CGAAGCCGAA
GCCGACGCTA TTTGCGATGG CGAAGATGTG TACATCATCG GGATCATGGA GCATATCGAA
CCGGCGGGTA TCCACTCCGG CGACTCGTAC GCCCTGCTAC CCACCTTCGA TCTGAGCGAG
AACGTAATCC GGCAGATCGA AGAGCACACG AAAAAGATTG CCGTTGCGCT CAAGACGGTC
GGGCTGATCA ATATTCAGTT CGCCATCAAG AACGAGGTGG TCTACATTAT CGAAGCAAAC
CCCCGCGCCA GCCGCACGGT GCCGTTCATC TGCAAAGCGT ATCAGGAGCC GTATGTGAAC
TACGCCACCA AGGTGATGCT GGGCGACAAG AAGGTGAAGG ATTTTGATTT CAAACCCGTT
AAAAAGGGCT ACGCCATCAA GATTCCGGTG TTCTCGTTCA GTAAGTTCCC GAATGTAAAT
AAGGAACTCG GCCCGGAAAT GAAATCGACC GGCGAGGGCA TTTACTTCAT CGACGACCTA
ACGGACGATT ATTTCCAGAA GGTCTACTCC GAGCGGAATC TGTATCTGAG CCGGTAG
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| Protein sequence | MPKNSNIRSV LIIGSGPIVI GQACEFDYAG SQAARSIRDE GIEVSLINSN PATIMTDPIN
ADYVYLLPLE KKSIVEILKK HQEMGKPIDA VLPTMGGQTA LNLAIDCDKA GIWKKYDVQI
IGVDIKAIET TEDREKFRLL MLQLGAGVCK GRTARSFLEG KEIAQEIGFP LVIRPSFTLG
GTGGGFVNRP EDFDKALTAG LHASPVHEVL VEQSVMGWKE YELELLRDNN GNFVIICSIE
NFDPMGIHTG DSITVAPAMT LPDTLYQKMR DLAITVMGGI GQFAGGCNIQ FSVNPQTDDI
IVIEVNPRVS RSSALASKAT GYPIAKIAAK MAIGYNLDEL MNPITGTTSA FFEPAIDYVI
VKVPRWNFDK FPGADRSLGL QMKSVGETMG IGRNFQEALQ KACQSLEIRR NGLGADGHEL
TDRNALTESL QHPSWNRLFH IYDAFKAGMS FRTIQQLTKI DPWFLHQIEE LIELEREIQQ
YDLDDIPPEL LRIAKQKGYA DRQLAHLLQV KESKIYQYRQ AHNIRRVYKC VDTCAAEFEA
KTPYYYSTFN NQVPITTDHA EPVSDLPGNE SIRSNRKKIV VLGSGPNRIG QGIEFDYSCV
HGVLAAKEAG YETIMINCNP ETVSTDPDIA DKLYFEPVFW EHVHAIIMHE QPEGVIVQLG
GQTALKMAEK LTRYGIKIIG TSWEALDLAE DRGQFSSLLR DLEIPYPKFG TVRESEGALE
LSRELGFPLL VRPSYVLGGQ NMKIVINENE LEQHVMKILQ DIPDNNILLD HFLENAIEAE
ADAICDGEDV YIIGIMEHIE PAGIHSGDSY ALLPTFDLSE NVIRQIEEHT KKIAVALKTV
GLINIQFAIK NEVVYIIEAN PRASRTVPFI CKAYQEPYVN YATKVMLGDK KVKDFDFKPV
KKGYAIKIPV FSFSKFPNVN KELGPEMKST GEGIYFIDDL TDDYFQKVYS ERNLYLSR
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