| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6236 |
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| Symbol | |
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| ID | 8730019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7562356 |
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| End bp | 7563279 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003390994 |
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| Protein GI | 284041064 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.573894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAACA AATTACCTGC GTCCGACTCC GCCGTTCCGG TTTATCAGCT TCAGTCATTT
CCCCGGCATG AACCCAATAA GCCATTTTAT ATGATCCGGC TGGAGCGGCT GGTTCAGGAG
TTTAAGGGAA TCGACAAGTC ACACACGCAT ACCTTTTACC TGGTCATGTG GATTAGCCGG
GGCAGCGGCA CCCACACCAT CGACTTCAAA ACGTACACCA TCGAGCCCAA TCAACTGTAT
TTTTTGACGC CGGGGCAGGT ACACAGTTGG GCGCTGTCGG CCGATACACA GGGGTTCAAT
TTGTTCTTCG ACGCCAATTT TTTCAAGGGG CGGTTTGGCA GTCGGCTCTA CCAGTATCCT
TTTTTCCATT CGCACCAGCA CCAGCCGCTC CTGTCGGCAA TTCCGCAACC GGCACTGTTC
ACCGATCTGC TGGCGTATGC TTATCAGGAA TACGAAGCCC ATCAGCCCAA TCGGTCCGAC
GTGTTTCTGT CCTTCGTTCA TATTCTGCTG GAAACCGCCA GCCGACTGTA TCACGAGCAG
CAGATCGGTA CGGATACCTA CCTGTACGAC CGCGTTCGTC AGTACGAAGA ACTACTCGAA
AACCAGTTTC TGACTGTTCG GGAGGTGAGT GCCTATGCCA GCCAGATGAA CCTGACCCCC
AACTACCTCA ATCACATCTG TCGGCTGGTA GTTGGTAAAA CGGCCAGCCA GCTCTGGCAG
GAACGGCTGC TGATTGAGAC GCAGCGTTTG CTGACGCACA CGGCGCAATC CATCAAGGAA
ATTGGTTTTC AGCTGGGATT CAACGACCCG TCGTACTTCG TTCGCTTCTT CAAAAAACAA
ACCGGCCAGA CACCCGCCGA ATTTCGACAG TCACTTGTGG GCAGCGGGGT AAGTGAAGTA
GTGAGCAGGC CATTTGTCCG ATAA
|
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| Protein sequence | MKNKLPASDS AVPVYQLQSF PRHEPNKPFY MIRLERLVQE FKGIDKSHTH TFYLVMWISR
GSGTHTIDFK TYTIEPNQLY FLTPGQVHSW ALSADTQGFN LFFDANFFKG RFGSRLYQYP
FFHSHQHQPL LSAIPQPALF TDLLAYAYQE YEAHQPNRSD VFLSFVHILL ETASRLYHEQ
QIGTDTYLYD RVRQYEELLE NQFLTVREVS AYASQMNLTP NYLNHICRLV VGKTASQLWQ
ERLLIETQRL LTHTAQSIKE IGFQLGFNDP SYFVRFFKKQ TGQTPAEFRQ SLVGSGVSEV
VSRPFVR
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