Gene Slin_6230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6230 
Symbol 
ID8730013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7554897 
End bp7555766 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390988 
Protein GI284041058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TGTTTTACGT TATTACCGGT CTGGCGGGTT TATGGTCATT TACGGGCGCT 
GATATCAACC TTTCGCTCGT TACCTCCACT ACGGTCGATT CATTAGGTGC CTGCCAGGGG
GTAAGTGTTC AGTCGGGGAA AGTGTATCTG TACGGCGACC GGGAAGTGGG CATGATCCGA
ACCTACACCG TCGAAAAGGG CGCGCTGACG TATACCGGAC AGGAAATAAA ACTGACCGAA
GGCGGCCGGG ACGTTATCAA CCACCCGACC GGCATTGCGT ACAACGCGAC AACACCCACG
TTTATTGGCA ACAGTATCCG GCTCAATCCG GAAGGCACGA AGTGGCGGGC GGTGATCTAC
GCCGTCAACT GGGCGGGTCT GCTTAAAACC GGCACCCTCG ACGGTAACCT GCTCAACACC
ATCGAAGACG ACGCCTGCAT TCAGGGTACC CGCCCCGAAT ACGTTCAGTA CCAGAACAAA
TGGTACGTGG CTACGGCCGA TTATGGCGAC AAAGCCAATG AAGTACGGCT CTACGACCCC
AGCCGCCTGG CCACAGCCAA GAAAACCAGC GAGCCGGGTG TGGTGGTCAA AAAATTCACC
TGTTCACCCT GGGTGCAAAA CCTGCACTGG ATTCCGTCGA AAGGCATACT GGTACTGATT
CAGAATCAGA TTGAAGGGCG ACGCTGGCGG TTTACGTTCG TGGATTTAAA AAAATCCATC
GAGTCGGGCC AGCAACAGGT TATCAACACC ATCGACGTCG ACAAGGCCGA TGAACTGGAA
GGGTTTACCC TTCTGGACGA CAGCAAAACG GGCATTGCCG TTACGTCGTC ACGCAGCAAC
AATGTGCATT TCGTTCACCT CAATTGGTAA
 
Protein sequence
MKALFYVITG LAGLWSFTGA DINLSLVTST TVDSLGACQG VSVQSGKVYL YGDREVGMIR 
TYTVEKGALT YTGQEIKLTE GGRDVINHPT GIAYNATTPT FIGNSIRLNP EGTKWRAVIY
AVNWAGLLKT GTLDGNLLNT IEDDACIQGT RPEYVQYQNK WYVATADYGD KANEVRLYDP
SRLATAKKTS EPGVVVKKFT CSPWVQNLHW IPSKGILVLI QNQIEGRRWR FTFVDLKKSI
ESGQQQVINT IDVDKADELE GFTLLDDSKT GIAVTSSRSN NVHFVHLNW