Gene Slin_6225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6225 
Symbol 
ID8730008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7546223 
End bp7546843 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding protein 
Protein accessionYP_003390983 
Protein GI284041053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.463619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA ACTACGCATC ATTGGCATTT ACGGAGCCGG TCAAAGCCGT ACAGGAACGC 
TATGGCAGTC GACAAACCTA CGAGCGCGTT GAGCAGCATA CCAGTTTTGC GGGCTTGACA
GCTACTGAAA TCGACTTTAT TGCTCATCGG GATAGCTTTT ACATAGCCAG TTATGGTGAA
AATGACTTCC CTTACATTCA GCACCGGGGC GGACCCAGGG GTTTTTTGAA AGCAATTGAC
GACACAACAC TCGGCTTTGT TGACTTCCGT GGGAACAGAC AGTATGTTTC CGTCGGTAAC
ATACTTACGC ACCCGAACGT CTCGCTGATT CTGATCGACT ACGCCCATCA GGCCCGCCTG
AAACTGTATG CCAAAGCCGA AGTTGTCGAG TTGGCTGATC GCCCGGATCT GTTCCGTCTC
CTGGACCCTG CTGATTACAA ACACACCCCC GAACGGATGC TGTTGCTCCA CGTAGAAGCG
TTTGACTGGA ATTGTCCACA ACACATCACT CCGCGCTACA CGCTGGAGGA AATCAACGGA
TTGCTTGCCA CCCAACGCGC TCGCATTACT CAACTGGAGG AAGAACTAAA GCGGTTGCAG
GGTACAGAAA TCAGGCGATA A
 
Protein sequence
MARNYASLAF TEPVKAVQER YGSRQTYERV EQHTSFAGLT ATEIDFIAHR DSFYIASYGE 
NDFPYIQHRG GPRGFLKAID DTTLGFVDFR GNRQYVSVGN ILTHPNVSLI LIDYAHQARL
KLYAKAEVVE LADRPDLFRL LDPADYKHTP ERMLLLHVEA FDWNCPQHIT PRYTLEEING
LLATQRARIT QLEEELKRLQ GTEIRR