Gene Slin_6223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6223 
Symbol 
ID8730006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7545058 
End bp7545597 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_003390981 
Protein GI284041051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.218919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACACG TTACAGTACC TACCCGAGAT CAGGTATCTC CTCAATCGCA GGCCGCTTTC 
GATGGCCTCC AAAAGATGCT GGGCTTTGTG CCCAATCTGT ACGCGACCAT TGCTCATTCA
GAAAATGGTT TACCGAGATA CCTGGCTTTT CAGGGGGCAA AAACGTCGCT GTCGAATAAG
GAAAAAGAGG TTGTTAATTT AGTAGTGAGC GAGGTCAATG GCTGTAATTA CTGCCTGAGT
GCCCATACGG CTATTGCTAA AATGAATGGC TTTTCGGACG ACGACATCCT GCATTTACGG
GCTGGTCACA GCGCAAATCC TAAAATCAAT GCGCTGGTCG TACTGGCTAA AGACATTACA
GAGAACAAAG GCCGTGTGTC GTCCGAAAAC CTCGATACTT TCTATGCCGC AGGCTATACC
CAGGGAAATC TGGTCGATGT GATTCTACAG GTTAGTGATA AAACGGCCAT GAACTACCTG
CACAACTTAA CGGAAGTTCC CATCGACTTT CCGCTGGCCC CCGCTTTAAC CGAAGCCTGA
 
Protein sequence
MLHVTVPTRD QVSPQSQAAF DGLQKMLGFV PNLYATIAHS ENGLPRYLAF QGAKTSLSNK 
EKEVVNLVVS EVNGCNYCLS AHTAIAKMNG FSDDDILHLR AGHSANPKIN ALVVLAKDIT
ENKGRVSSEN LDTFYAAGYT QGNLVDVILQ VSDKTAMNYL HNLTEVPIDF PLAPALTEA