Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6223 |
Symbol | |
ID | 8730006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7545058 |
End bp | 7545597 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | alkylhydroperoxidase like protein, AhpD family |
Protein accession | YP_003390981 |
Protein GI | 284041051 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.218919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACACG TTACAGTACC TACCCGAGAT CAGGTATCTC CTCAATCGCA GGCCGCTTTC GATGGCCTCC AAAAGATGCT GGGCTTTGTG CCCAATCTGT ACGCGACCAT TGCTCATTCA GAAAATGGTT TACCGAGATA CCTGGCTTTT CAGGGGGCAA AAACGTCGCT GTCGAATAAG GAAAAAGAGG TTGTTAATTT AGTAGTGAGC GAGGTCAATG GCTGTAATTA CTGCCTGAGT GCCCATACGG CTATTGCTAA AATGAATGGC TTTTCGGACG ACGACATCCT GCATTTACGG GCTGGTCACA GCGCAAATCC TAAAATCAAT GCGCTGGTCG TACTGGCTAA AGACATTACA GAGAACAAAG GCCGTGTGTC GTCCGAAAAC CTCGATACTT TCTATGCCGC AGGCTATACC CAGGGAAATC TGGTCGATGT GATTCTACAG GTTAGTGATA AAACGGCCAT GAACTACCTG CACAACTTAA CGGAAGTTCC CATCGACTTT CCGCTGGCCC CCGCTTTAAC CGAAGCCTGA
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Protein sequence | MLHVTVPTRD QVSPQSQAAF DGLQKMLGFV PNLYATIAHS ENGLPRYLAF QGAKTSLSNK EKEVVNLVVS EVNGCNYCLS AHTAIAKMNG FSDDDILHLR AGHSANPKIN ALVVLAKDIT ENKGRVSSEN LDTFYAAGYT QGNLVDVILQ VSDKTAMNYL HNLTEVPIDF PLAPALTEA
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