Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6222 |
Symbol | |
ID | 8730005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7544399 |
End bp | 7544959 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003390980 |
Protein GI | 284041050 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.366462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTA ATACTGCATC AAAAGCCGAA ACACCAGCCG TACGCCAGCG AATTCTCGAC ACGGCTGCGC GGTTGTTTCA TCGGCAAGGT TATAACTCAA CGGGTATCAA TCAACTCATT GAGGAGGCCG GTGTGGCGAA AGCGAGTCTT TATCAGCATT TCAAAACCAA AGATGATATT TTGAAAGCGT ATTTGATGGA AACCAGTCAG GCCTGGTTCG AACAGGTTGA TAAGACTATT CAAGGTCAGT ATACGACGAA AGAGAAAGTA CTGGCCCTGT TCGATATGCT GGGCGATTTT GCCACGAGTG TTGATTTTCG GGGGTGTAAT TTCCAGAACG CCCTTGTTGA ACTTGACATT AATGAGACGG ACACCCGGCA ATTTATCCAG GGCCACAAAT CCCGAATGGG TCAAGTATTC GCTGACTTAC TCTCGTCGGC CGAACCTGAT GTAGCCAATG AAGTGACCTT ACTCTTTGAA GGAGCCTTGA TTACCAGTCA GTTGTTTCAT AATCTAGAGC CAATCAAAAC GGCCCGACGT ATCGTGGAGC GAATACTCTA A
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Protein sequence | MKTNTASKAE TPAVRQRILD TAARLFHRQG YNSTGINQLI EEAGVAKASL YQHFKTKDDI LKAYLMETSQ AWFEQVDKTI QGQYTTKEKV LALFDMLGDF ATSVDFRGCN FQNALVELDI NETDTRQFIQ GHKSRMGQVF ADLLSSAEPD VANEVTLLFE GALITSQLFH NLEPIKTARR IVERIL
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