Gene Slin_6222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6222 
Symbol 
ID8730005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7544399 
End bp7544959 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content47% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003390980 
Protein GI284041050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.366462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTA ATACTGCATC AAAAGCCGAA ACACCAGCCG TACGCCAGCG AATTCTCGAC 
ACGGCTGCGC GGTTGTTTCA TCGGCAAGGT TATAACTCAA CGGGTATCAA TCAACTCATT
GAGGAGGCCG GTGTGGCGAA AGCGAGTCTT TATCAGCATT TCAAAACCAA AGATGATATT
TTGAAAGCGT ATTTGATGGA AACCAGTCAG GCCTGGTTCG AACAGGTTGA TAAGACTATT
CAAGGTCAGT ATACGACGAA AGAGAAAGTA CTGGCCCTGT TCGATATGCT GGGCGATTTT
GCCACGAGTG TTGATTTTCG GGGGTGTAAT TTCCAGAACG CCCTTGTTGA ACTTGACATT
AATGAGACGG ACACCCGGCA ATTTATCCAG GGCCACAAAT CCCGAATGGG TCAAGTATTC
GCTGACTTAC TCTCGTCGGC CGAACCTGAT GTAGCCAATG AAGTGACCTT ACTCTTTGAA
GGAGCCTTGA TTACCAGTCA GTTGTTTCAT AATCTAGAGC CAATCAAAAC GGCCCGACGT
ATCGTGGAGC GAATACTCTA A
 
Protein sequence
MKTNTASKAE TPAVRQRILD TAARLFHRQG YNSTGINQLI EEAGVAKASL YQHFKTKDDI 
LKAYLMETSQ AWFEQVDKTI QGQYTTKEKV LALFDMLGDF ATSVDFRGCN FQNALVELDI
NETDTRQFIQ GHKSRMGQVF ADLLSSAEPD VANEVTLLFE GALITSQLFH NLEPIKTARR
IVERIL