| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6217 |
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| Symbol | |
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| ID | 8730000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7537621 |
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| End bp | 7540110 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_003390975 |
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| Protein GI | 284041045 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.597655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT ACTCAACTCT ACTCTGCGGC TTCAGTCTGC TGCTGGCCAT GATGGCGGGA
TGCCACCGGG CGGGCAATAC AGCCGCGTCT TCGGAAGAGG CTGAAACGTA TCAGAAGCTG
GCGGCTAAAC GGGTCAATCT CCCCAACGGC TGGGCGCTGA CGCCACCGGG CCGTAGCCTC
GATCTGGACG ATCTGCCTCT GAATCTGGTG GTGTCGCCAT CGAAAAAATA CCTGGCCGTA
ACTAACAACG GGCAGAGTAC CCAAAGCATC ACCCTGATCG ATGCCGGTTC GGAGCAGATT
CTGGATACGG CTAAAGTTGG TAAGTCGTAT TTGGGACTGG CGTTTAGTCA GGACGAAACA
CGGCTCTATG CGTCGGGTGG GAACGATAAT AAGGTTCTGG TCTATAAAAT AGAGAACAAA
CAACTGGTAC CCGACGAGCC GATTGTGCTC GGAAAACCCT GGCCCGTTAA AATTTCGCCG
ACGGGCTTGT GCGTCGATGA TGCGAAGAAT AGACTTTATA TCGTCACGAA AGAAGATAGC
TCGCTCTATA TCGCCGATAC CAAGACCCGG CAGGTACTTA AAAAGCTGAA CATCGGAGCT
GCAGCTTACA CCTGCCTGCT GTCGCCCGAC AAAAATGAGT TGTTTATTTC GTCCTGGGGT
GGTGCCAGCG TGCTGGTCGT GGATGTCAAC AAACAGACGA TAGCCGCTAA AATTCCGACG
AATAAGAATC CCAACGACCT GCTGCTTACC AAAGATGGGA AATACCTCTA CGTAGCCAAT
GGCAACGACA ACACCGTGGC GCTCATCGAC GTCGCGAAGC GGCAGGTGAT TGAAACGCTC
ACGACATCGC TCTTTCCCAA TGCACCCGTT GGCACCACGC CCAACGGACT AGCCCTGAGT
GACGACGAAA ACACGCTCTA CATCGCCAAT GCTGACAACA ACTGTCTGGC GGTATTCGAC
GTAACGAAGA AAGGACACAG TCTGTCCAGC GGTTTTATTC CGACGGGCTG GTACCCAACG
GCCGTGAAGG TGATTGGCTC AAAGCTCTAC GTCACCAACG GCAAAGGATT TTCCTCGAAA
GCCAACCCCA AAGGGCCTAA TCCAGTACGT ACGCGTACTC CACAGCAGGT TGGCCCCAAT
CCGCAGGCCA ATCCCGGCCC GGTGCAGTAC ATTGCTGGTC TGTTCAAGGG TACGCTCTCC
ATCATCGACA CGCCGGATAC GGAAACGCTG GCGGCTTATT CGCGGCTGGT ATACGCCAAT
ACGCCGTACA CCAAGAGTAA GGAACTGCGT ACGGAGGGCG AAGCTGGTAA CCCAATTCCG
ATGCGGGTGG GAGATAAGTC GCCCATCAAA TACGTGTTTT ACATCATCAA GGAGAACCGC
ACCTACGACC AGATTCTGGG CGACATGAAA GAAGGCAACG GCGATGCGTC TCTCTGCCTG
TTCCCCGAAA AAGTAACGCC CAACCAGCAC GCGCTGGCAA AGGAGTTTGT ACTGCTGGAC
AACTTCTACG TCGATGCCGA AGTCAGTGCC GATGGGCATA ACTGGTCGTC GGCGGCTTAC
GCCAATGATT ATGTCGAGAA GAACTGGGTA ACCAGCTATG GCGGTCGGGG CGGTACGTAC
GATTACGAAG GCCAGAAAGA AATAGCGCAT CCCCGCGATG GATTCATCTG GGACCATTGC
CAGCGGGCGG GCATATCGTT CCGGAGTTAC GGCTGGTTTG CCGACGATGA AAAACCGAAC
ATCAAAACGC TGGAAGGCAA ATTCTGCCCG ACCTTCAAAG GGTATAATCT GGGCTATATG
GACAGCAAAC GCGAGGAAGC CTGGGAAGCC GATTTTGATG GATTGGTAAC CGCCGGAAAA
CTGCCCACCT TCAATACACT CCGATTTGGC AACGACCATA CGTCGGGTGC CCGTATTGGC
ATGCCCACGC CCGATGCCGC CGTTGCGGAT AACGATCTGG CCGTGGGTCG GTTCGTAGAG
CACCTGTCCA AAAGTTCGAT CTGGAATCAG TCGGTGGTGT TTATTCTGGA AGATGATGCC
CAGAACGGTC CCGATCACGT GGACGCGCAC CGCTCCATCG CGTTCGTAGC CGGGGGCTTT
GTGAAGCGTG GTTTTGTGGA TCATACCATG TACTCGACCT CGGGGATGCT GCGTACCATC
GAGCTGATTC TAGGGCTGAA ACCCATGAGC CAGTACGATG CGGCTGCTAC GCCCATGTGG
CGATGTTTCG ATAAAAAAGC TAATCCGGCT CCGTTTACCG CCCGTGAAGC CGGTATCGAC
ATCAACCAGA AAAACGTAGC CGTCAATGTA AACTCGAAAC GCTCCTCGCT CTTTAACCTA
ACCCGTCCTG ACGAAATCGA CGACCTTATT TTCAGTGAGA TTGTGTGGCA AACGGTGCGT
GGGGAGAAAA GCGTGATGCC TGCTCCGCGC CGGGGCGCCT TTGTCCGGAC GGGTAAAGAT
GCCGATGGCG ATGAGGACGA TGATGACTAA
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| Protein sequence | MKTYSTLLCG FSLLLAMMAG CHRAGNTAAS SEEAETYQKL AAKRVNLPNG WALTPPGRSL
DLDDLPLNLV VSPSKKYLAV TNNGQSTQSI TLIDAGSEQI LDTAKVGKSY LGLAFSQDET
RLYASGGNDN KVLVYKIENK QLVPDEPIVL GKPWPVKISP TGLCVDDAKN RLYIVTKEDS
SLYIADTKTR QVLKKLNIGA AAYTCLLSPD KNELFISSWG GASVLVVDVN KQTIAAKIPT
NKNPNDLLLT KDGKYLYVAN GNDNTVALID VAKRQVIETL TTSLFPNAPV GTTPNGLALS
DDENTLYIAN ADNNCLAVFD VTKKGHSLSS GFIPTGWYPT AVKVIGSKLY VTNGKGFSSK
ANPKGPNPVR TRTPQQVGPN PQANPGPVQY IAGLFKGTLS IIDTPDTETL AAYSRLVYAN
TPYTKSKELR TEGEAGNPIP MRVGDKSPIK YVFYIIKENR TYDQILGDMK EGNGDASLCL
FPEKVTPNQH ALAKEFVLLD NFYVDAEVSA DGHNWSSAAY ANDYVEKNWV TSYGGRGGTY
DYEGQKEIAH PRDGFIWDHC QRAGISFRSY GWFADDEKPN IKTLEGKFCP TFKGYNLGYM
DSKREEAWEA DFDGLVTAGK LPTFNTLRFG NDHTSGARIG MPTPDAAVAD NDLAVGRFVE
HLSKSSIWNQ SVVFILEDDA QNGPDHVDAH RSIAFVAGGF VKRGFVDHTM YSTSGMLRTI
ELILGLKPMS QYDAAATPMW RCFDKKANPA PFTAREAGID INQKNVAVNV NSKRSSLFNL
TRPDEIDDLI FSEIVWQTVR GEKSVMPAPR RGAFVRTGKD ADGDEDDDD
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