| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6216 |
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| Symbol | |
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| ID | 8729999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7534689 |
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| End bp | 7537424 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_003390974 |
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| Protein GI | 284041044 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0774537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA ATTTACGATC AATTGCTTTT GGATTATGTA TACTTTCCAG CGTTTCGCTG
TTGAGTAGCT GTCATCAGTT TGGGCCTGTG TCTGGCGGCC GTTCGGCGGT CTCGGCGGCT
TATCGAACGG CTACGGACGA CAGTACGCTC AGTAACACAT CCCCTTTTCT AATGCCCTAT
AACCGGGTGA TCGACGGGGC GGGGGAGTCG GTGAGTTTTG GTGAGGCTAA TGTGGAAAAT
CATAGTCTGG ATGCCGTGCT GCTACCCGAT AAAAAAACGC TGGTGGTGGA AGATCGCTAC
GGCATTGCGT TTTTCGATGT GAAAAGTCAC AAGCTGGTTT CGCGTTGGGA TTACAATAAA
GGGTCGAGAC TAAAGGGCGG TATGAGTTCC TTTTCGGGGA TTAAAGCCAT CGTTCATCAC
GATTCAACCT ATATTTTCTG GGGTGCCGGT GGCCGGGATG TCGCTAACTC GCACGTGATG
CAGGTCGTTT GGGACGGTTC CCGCGCCCGG CTCATTCGGG CCATTCCGTT CCAGCCTGTG
GCTCCAGCTA CCATCGCCCT GCCGAATGAA GTGGTGCTAA AAGAGGAAGC GGGCGAACTG
ATGCTCTACA CCGTTCTGAA CGGCAATAAC CAACTGGTGA AAGTCCGGGT GAATGACCAG
CAGGTCGTCT GGACGGCACC TACCGGCGTG GCACCCTTTG GCCTGACGCT CCTCGGCAAC
CGCGCCTACG TGACCAACTG GGCGGGGCCG GTTCCCGATG CGACCAACGG CTTCGAAACG
GCCGGTATTC CCTGGGGAAG TGCCTATATC GACCCAAAAA CGGGTGCTAT GGCGCGGGGA
ACGGTATCCA TCATCGACAT TACACAAGGC AAACCGGAGA GGGAGTTATC CGTCGGTCTG
CACCCCAACG CCATCATCAG CAGTCCCGAC CAGCAGTTTT TGTACGTTGC CAATGGCAAC
AGCGATTACG TGTCGGTCAT AGATGCTAAA ACCCAGCAGG TGACGGATTC CATTTTCGTG
GGCTTATTTA ACCGGGGGAA TGGCTACATC GGCAGTACAC CGAATGCGCT GGCCATCAAT
CCGCAGGGAA CCACGCTTTA TGTGGCTAAC GGGATGGATA ATGCGCTGTG CGTGGTGGCA
CTTGGCGAGA AAGCATCGGC TACTGGAAAA GGTGCTTCGG TCATCAAAGG CTATATTCCG
ACACAGGCGT ACCCCTCGGG TATTGTGCTG AATGGCGATG AACTGTACGT GACGAATCTG
GAAGCTGTAG GAGCCCGAAT TGCCAACCCC GTCGATCAGG GAAGCCAGGG GAAGAACTCA
TCTAAAGAAT TAAAAGCCTA CAACTCGCAC AAACAACTGG CCTCTATTTC CTTCATTCCC
GTTCCGAGCC AGCCGCAGTT GGACACCTAC ACTGACAAGG TGAAACGCAT GAGTCAGCAG
TTTCGGCTTG CCCTGACGGA GCAACTGCCC CGGCCAAACG TGGCTCCCAA ACCCGTTCCC
GAGCGCATTG GAGAGCCGTC GGTGTTCAAG CATGTGCTGT ACATCATCAA GGAAAATCGC
ACCTACGATC AGGTGCTGGG CGATATGCCG CAGGGCAACG GTGCACCCGA ACTGTGCATC
TTCGGCGACA GCATCACGCC CAACCAGCAC CGGCTGGCGC AGGATTACCT GCTGATGGAC
AACTACCACG TATCCGGAAA ATCGTCGGCC GAAGGGCACC ACTGGGCCAG CGCGGCTATG
GTGACGGACT ATACCGAAAA GAGCGTTCGG GCGTGGTTTC GGAGTTATCC GCATGTGCTG
TATGATGCCA TGGTGTACAA CAAAAAAGGG CTGATCTGGA ACAACGCCCT CGACCACGGT
AAAACGGTAC GCATGTATGG AGAAGCCTGT TCCTGCGATT ACGACAAAAA AGCCTATGAC
TGGAGCAAGC TGTTTCAGCT TCGGCAGGAA GGCAAACCGT TCTCCTACAC CAATACCACG
ACCATTTCGC GGGTGCGGCC CATTCTGGCC ATGGATTTCC CGGGCTGCGA CGACGAAACC
ATCAGCGACC AGATGCGTGC TGATGCCTTC ATCAAGGAGC TGAACGAAAC AGTTGCTAAC
CCCAATGCCG ATCTGCCGAA CCTGATGGTG ATGTCGCTGC CCAACGACCA CACCTCGGGC
ATGAGTCCGG GTTTTCCCGT CCCTCGTGCG ATGGTGGCCG ATAACGATCT GGCCGTTGGG
CGCATTGTCG ATGCCATCAC TCATAGCCGG TTTGCCGCTT CGACGGTCAT TTTCATTACG
GAAGATGATT CGCAGGCGGG TTGGGACCAT GTGTCGGCGT ACCGGACAAC GGGTTTCGTC
ATTAGCCCCT ATTCGCGGTT ACAGAAAACA GTGCACACGA ATTACAACCA GACCTCGGTG
GTGCGCACGA TGGAGCAGAT TCTGGGCCTG CCGCCCATGA ACGTCATCGA CGCCACCGCC
CTGCCCATGT TCGACTGTTT TACGGATAAG CCGGATTTAT CGTTCACCTA CAAGGCAATA
CAAAACCGGG TGTCATTGAC CGAAATGAAT GCGTTACCAG CGGGGCAGAA AGGCGCGTCG
CTGCGCTTTA CGAATCAGTC GATTCGCTTT GGCTTTCACC AGATTGACCG GGGGCACGAC
GACCTTCTTA ACCGGATTTT GTGGTTCACA GCCAAGGGCA AAAAGAAATA CCCCGCTCAT
CTGGCCGGTG CTGAAGATGA TGACGATGAT GATTAG
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| Protein sequence | MKINLRSIAF GLCILSSVSL LSSCHQFGPV SGGRSAVSAA YRTATDDSTL SNTSPFLMPY
NRVIDGAGES VSFGEANVEN HSLDAVLLPD KKTLVVEDRY GIAFFDVKSH KLVSRWDYNK
GSRLKGGMSS FSGIKAIVHH DSTYIFWGAG GRDVANSHVM QVVWDGSRAR LIRAIPFQPV
APATIALPNE VVLKEEAGEL MLYTVLNGNN QLVKVRVNDQ QVVWTAPTGV APFGLTLLGN
RAYVTNWAGP VPDATNGFET AGIPWGSAYI DPKTGAMARG TVSIIDITQG KPERELSVGL
HPNAIISSPD QQFLYVANGN SDYVSVIDAK TQQVTDSIFV GLFNRGNGYI GSTPNALAIN
PQGTTLYVAN GMDNALCVVA LGEKASATGK GASVIKGYIP TQAYPSGIVL NGDELYVTNL
EAVGARIANP VDQGSQGKNS SKELKAYNSH KQLASISFIP VPSQPQLDTY TDKVKRMSQQ
FRLALTEQLP RPNVAPKPVP ERIGEPSVFK HVLYIIKENR TYDQVLGDMP QGNGAPELCI
FGDSITPNQH RLAQDYLLMD NYHVSGKSSA EGHHWASAAM VTDYTEKSVR AWFRSYPHVL
YDAMVYNKKG LIWNNALDHG KTVRMYGEAC SCDYDKKAYD WSKLFQLRQE GKPFSYTNTT
TISRVRPILA MDFPGCDDET ISDQMRADAF IKELNETVAN PNADLPNLMV MSLPNDHTSG
MSPGFPVPRA MVADNDLAVG RIVDAITHSR FAASTVIFIT EDDSQAGWDH VSAYRTTGFV
ISPYSRLQKT VHTNYNQTSV VRTMEQILGL PPMNVIDATA LPMFDCFTDK PDLSFTYKAI
QNRVSLTEMN ALPAGQKGAS LRFTNQSIRF GFHQIDRGHD DLLNRILWFT AKGKKKYPAH
LAGAEDDDDD D
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