Gene Slin_6215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6215 
Symbol 
ID8729998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7533171 
End bp7534493 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content58% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionYP_003390973 
Protein GI284041043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCT TACTTCCGCG ACGCGAATTT ATCCGACAGG CCACCGCAGC GAGCGTCATG 
CTGGGCGCTC CCGGTCCGTT TATTCAAACC AATGGCTCAG CCGCCGAGAA AGTGGTCGTT
GGCATTATGG GCACCAACGG ACGGGGTGAA GCCCTCGCTC AGGGGTTCGC TAAACTGCCC
GGTGCCGAAG TGGGCTATAT CTGCGATGTC GATGAACGGG CCGTTGCCAA AGGATTAAAA
GCCGTTCAAT CGGGCGGGCA GAAGAAAGCT CCAAAAACCA CCGGTGATTT CAGGCAAATA
CTCGACGATA AATCCATCGA TGCACTGGTC ATTGCCGCCC CCGACCACTG GCACGCTCCA
GCGGCTATTC TGGCTCTAAA AGCGGGCAAA AACGTGTATG TCGAAAAGCC GTGCAGCCAC
AACCCCCGCG AAGGCGAATG GCTGGTGCAG GCAGCACAGA AATACAAAAA AGTGGTGCAG
ATGGGCAACC AGCGCCGGTC ATGGCCAAAA GTGGTCGAAG CCATTAATAT GGTGAAAGAA
GGTGCTATCG GTCGGGCGTA CTTTGCCAAA GCCTGGTACG CCAATACCCG TGTGAGCATC
GGCCACGGTA AACCCGCCCC CGTACCCGCC GGATTCAACT TCGACCTCTG GCAAGGTCCG
GCCCCACGTC GGGAGTACCG CGACAATATT CACCCCTACA ATTGGCACTG GTTCTGGCAC
TGGGGCACCG GCGAACTTCT CAACAACGGC ACCCACTTCA TCGACCTGTG CCGCTGGGGG
CTGGAGGTCG ACTACCCTAC GGAAGTCAAC TCGGTGGGTG GCCGGTATGC CTTCGAGGAC
GACTGGGAAA CGCCGGACAC GCAGCTCACC AACTTTGCTT TTGCCAACCG GAAGAGTATT
TCGTGGGAAG GCCGAAGCTG CAACGGGCGC AACGTCGAAG GCATTTCAGG CGGTGTCGAT
TTCTACGGGG AGAAAGGCAC AATGGCTATT CAGGGCAACG GTTACACCCT CTACGACAAC
AAGAACAAAG AACTGAAAAA GGTCAGTGGC GACTCGAACC AGATCACCGC ATCGGGGCCG
GGCTTCGATA TGGACGTCGA CCATTTCGCT AACTTCCGCG ACGCCATCCG GACGGGTATT
CGGCCGGTTT CGTCCATCGA AGATGCCAAC AAAAGCGTGT TGCTGTGTCA GTTAGGCAAC
ATCGCCCACC GCGTAGGCCA CTCACTAAGC TGCGACCCCG CCACCGGACG CATTAAAAAC
GACCCCGACG CCATGAAACT CTGGGGCCGG GAATATGATC CGGCCTGGCA GCCGGTGGTG
TGA
 
Protein sequence
MAILLPRREF IRQATAASVM LGAPGPFIQT NGSAAEKVVV GIMGTNGRGE ALAQGFAKLP 
GAEVGYICDV DERAVAKGLK AVQSGGQKKA PKTTGDFRQI LDDKSIDALV IAAPDHWHAP
AAILALKAGK NVYVEKPCSH NPREGEWLVQ AAQKYKKVVQ MGNQRRSWPK VVEAINMVKE
GAIGRAYFAK AWYANTRVSI GHGKPAPVPA GFNFDLWQGP APRREYRDNI HPYNWHWFWH
WGTGELLNNG THFIDLCRWG LEVDYPTEVN SVGGRYAFED DWETPDTQLT NFAFANRKSI
SWEGRSCNGR NVEGISGGVD FYGEKGTMAI QGNGYTLYDN KNKELKKVSG DSNQITASGP
GFDMDVDHFA NFRDAIRTGI RPVSSIEDAN KSVLLCQLGN IAHRVGHSLS CDPATGRIKN
DPDAMKLWGR EYDPAWQPVV