Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6215 |
Symbol | |
ID | 8729998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7533171 |
End bp | 7534493 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003390973 |
Protein GI | 284041043 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCT TACTTCCGCG ACGCGAATTT ATCCGACAGG CCACCGCAGC GAGCGTCATG CTGGGCGCTC CCGGTCCGTT TATTCAAACC AATGGCTCAG CCGCCGAGAA AGTGGTCGTT GGCATTATGG GCACCAACGG ACGGGGTGAA GCCCTCGCTC AGGGGTTCGC TAAACTGCCC GGTGCCGAAG TGGGCTATAT CTGCGATGTC GATGAACGGG CCGTTGCCAA AGGATTAAAA GCCGTTCAAT CGGGCGGGCA GAAGAAAGCT CCAAAAACCA CCGGTGATTT CAGGCAAATA CTCGACGATA AATCCATCGA TGCACTGGTC ATTGCCGCCC CCGACCACTG GCACGCTCCA GCGGCTATTC TGGCTCTAAA AGCGGGCAAA AACGTGTATG TCGAAAAGCC GTGCAGCCAC AACCCCCGCG AAGGCGAATG GCTGGTGCAG GCAGCACAGA AATACAAAAA AGTGGTGCAG ATGGGCAACC AGCGCCGGTC ATGGCCAAAA GTGGTCGAAG CCATTAATAT GGTGAAAGAA GGTGCTATCG GTCGGGCGTA CTTTGCCAAA GCCTGGTACG CCAATACCCG TGTGAGCATC GGCCACGGTA AACCCGCCCC CGTACCCGCC GGATTCAACT TCGACCTCTG GCAAGGTCCG GCCCCACGTC GGGAGTACCG CGACAATATT CACCCCTACA ATTGGCACTG GTTCTGGCAC TGGGGCACCG GCGAACTTCT CAACAACGGC ACCCACTTCA TCGACCTGTG CCGCTGGGGG CTGGAGGTCG ACTACCCTAC GGAAGTCAAC TCGGTGGGTG GCCGGTATGC CTTCGAGGAC GACTGGGAAA CGCCGGACAC GCAGCTCACC AACTTTGCTT TTGCCAACCG GAAGAGTATT TCGTGGGAAG GCCGAAGCTG CAACGGGCGC AACGTCGAAG GCATTTCAGG CGGTGTCGAT TTCTACGGGG AGAAAGGCAC AATGGCTATT CAGGGCAACG GTTACACCCT CTACGACAAC AAGAACAAAG AACTGAAAAA GGTCAGTGGC GACTCGAACC AGATCACCGC ATCGGGGCCG GGCTTCGATA TGGACGTCGA CCATTTCGCT AACTTCCGCG ACGCCATCCG GACGGGTATT CGGCCGGTTT CGTCCATCGA AGATGCCAAC AAAAGCGTGT TGCTGTGTCA GTTAGGCAAC ATCGCCCACC GCGTAGGCCA CTCACTAAGC TGCGACCCCG CCACCGGACG CATTAAAAAC GACCCCGACG CCATGAAACT CTGGGGCCGG GAATATGATC CGGCCTGGCA GCCGGTGGTG TGA
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Protein sequence | MAILLPRREF IRQATAASVM LGAPGPFIQT NGSAAEKVVV GIMGTNGRGE ALAQGFAKLP GAEVGYICDV DERAVAKGLK AVQSGGQKKA PKTTGDFRQI LDDKSIDALV IAAPDHWHAP AAILALKAGK NVYVEKPCSH NPREGEWLVQ AAQKYKKVVQ MGNQRRSWPK VVEAINMVKE GAIGRAYFAK AWYANTRVSI GHGKPAPVPA GFNFDLWQGP APRREYRDNI HPYNWHWFWH WGTGELLNNG THFIDLCRWG LEVDYPTEVN SVGGRYAFED DWETPDTQLT NFAFANRKSI SWEGRSCNGR NVEGISGGVD FYGEKGTMAI QGNGYTLYDN KNKELKKVSG DSNQITASGP GFDMDVDHFA NFRDAIRTGI RPVSSIEDAN KSVLLCQLGN IAHRVGHSLS CDPATGRIKN DPDAMKLWGR EYDPAWQPVV
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