Gene Slin_6211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6211 
Symbol 
ID8729994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7528518 
End bp7529813 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content56% 
IMG OID 
Productglucose/galactose transporter 
Protein accessionYP_003390969 
Protein GI284041039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAA GAACCCTCAG CTCACGCGAC ACAACGATCT CTATCGCCAT CATCGGCGTG 
CTATTTTTTG TATTCGGGTT CGTCACCTGG GTCAACGCCA TTCTGATCCC GTATTTCAAG
ATCGCCTGTG AGTTGACCAA TTTTCAGTCG TACCTCGTCG CATTCGCGTT CTACATTTCT
TACCTCGTGA TGTCGGTTCC GGCGTCGCTG CTGCTGAAGA AAGTCGGATT CAAGCGCGGG
ATGATGGTGG GCTTTTTTAC GATGTCGGTG GGGGCTATGA TTTTTATACC GGCCGCGCTG
AGTCGGGCGT ATCTGGTTTT CCTGACGGGG CTTTTTACCA TCGGTGTCGG GCTGGCTATC
CTGCAAACAG CCGCCAACCC ATACATCACG GTGCTGGGTC CGCACGACCG GGCCGCCCAG
CGCATCAGCA TCATGGGTAT CTGCAACAAA ATGGCGGGCA TTCTGGCCCC GCTACTGTTT
GCAGCCGCCA TCCTCCGCCC TACCGACAGC GACCTGTTCA AACAATTGCC GACGATGGAG
CCGACCGTTC GGGCAGCCGC GCTGGATGCA TTGATTCGGC GGGTGATTGT ACCGTATTCG
GTGGTCAGCG TCGTATTGAT GGGGCTGGGT TTGTTGATCT GGCGGTCGCC CCTTCCCGAA
ATTGACACCG AACACGAGAG CGACGATCTG GCGATAGCCA ACGCCGACAA AACCAGTATT
CTGCAATTTC CGCAAGCCGT GCTGGGTGCG GTGGCCATCT TTTTTCACGT GGGTGCTCAA
GTCGTTGCCA TCGACACCGT TATCGGCTAC GCCACCTCAA TGGGGCTGTC CATCCTCGAA
GCCAAAGTAT TTCCGTCCTA CATCCTGACC GCCACGATTA CGGGCTATAT CATTGGCATC
AGCGCCATTC CCAAATGGAT TCGGCAGGTG AATGCGTTCC GCATCTGTAC CGGGCTGGGT
CTTATCTTCA GCCTGCTGTT ACTGACCACC AGCGGTCGTG TCACCCTGCT CGGGCATACG
ACCGATATTT CCCTGTGGTT TCTGATTAGT CTGGGGCTGG CGAATTCACT GATCTGGGCG
GGTATCTGGC CGCTGGCCCT TGACGGGCTG GGGCGTTTCA CCAAAGTAGG CGCGTCTTTA
CTCATTATGG GCCTGTGCGG CAATGCCCTA ATGCCACTCG TCTACGGCCA CTTCGCCGAT
GTATATGGCA CGAAGTCAGC TTACTGGCTG CTGCCAGTCT GTTACAGCTA CCTGATTTTT
TACGCGGGGT ATGGGCATAA GATTCGGCGG TGGTGA
 
Protein sequence
MNSRTLSSRD TTISIAIIGV LFFVFGFVTW VNAILIPYFK IACELTNFQS YLVAFAFYIS 
YLVMSVPASL LLKKVGFKRG MMVGFFTMSV GAMIFIPAAL SRAYLVFLTG LFTIGVGLAI
LQTAANPYIT VLGPHDRAAQ RISIMGICNK MAGILAPLLF AAAILRPTDS DLFKQLPTME
PTVRAAALDA LIRRVIVPYS VVSVVLMGLG LLIWRSPLPE IDTEHESDDL AIANADKTSI
LQFPQAVLGA VAIFFHVGAQ VVAIDTVIGY ATSMGLSILE AKVFPSYILT ATITGYIIGI
SAIPKWIRQV NAFRICTGLG LIFSLLLLTT SGRVTLLGHT TDISLWFLIS LGLANSLIWA
GIWPLALDGL GRFTKVGASL LIMGLCGNAL MPLVYGHFAD VYGTKSAYWL LPVCYSYLIF
YAGYGHKIRR W