Gene Slin_6204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6204 
Symbol 
ID8729987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7517060 
End bp7517842 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID 
ProductTIR protein 
Protein accessionYP_003390962 
Protein GI284041032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.396579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC AAAGCACTAA CTCTACTGAT AAGAGAGAAA TAAAACTGGA AGAGAGAAAA 
GTTAATATTT TTTATTCCTA TTCGCACCGG GATGAAGAGT TGCGTGAACG GTTTGAAGTA
CACATGGCCG GATTAAAACG AAAAGGTTTG ATCGAAGAAT GGCATGATCG AAAGATTTTA
TCAGGGCAGA ATTTTGAGAA TGCGATTGAC AAGAATCTGA CCAATGCAGA CATTGTTATC
TTTTTTGTAA GTGCTGACTT TATCGCTTCG GACTATTGCT ATAAAAATGA AGTAATAAAA
TCCGTAGAGC GGCATAACCA AGGGCACTGC ACCGTAGTAC CCGTAATTTT AAGGGAATGC
GACTGGGAGG GCGCACCGTT TGAAAGTATT CATGGCTTAC CAACAGATAT GAAACCGGTA
GTGAGTAAAC ACTGGAATGA TACGGATGAA GCCTTCACCA ATATTGTAAG AGAGCTGAAG
AAAATTATCA AGAAAAAATT CTCCGATAAA GAAAAACTCA ACTTTGTCAA TAATAAAAAG
TCTATAAAAT TTATTTTGAG AAGTGGTGTC AGCGGCCAGG AGTTCGACAT AGAAGCGCCA
TCATCATCTA CGGTAAAGGA GCTACTAGAT GAATTGATAA AGAATGAAAC GCTCGACCGC
GATTACGAAT ACATATTTAT TCTAAAATAC AACTCACAAC AACTGGAGTT AAATCAGACG
CTATTCGATT GCCAGGTAAG GGATGGGGAC ACTATACTTG CCTCAACGAC ATCACGTAAA
TAG
 
Protein sequence
MKTQSTNSTD KREIKLEERK VNIFYSYSHR DEELRERFEV HMAGLKRKGL IEEWHDRKIL 
SGQNFENAID KNLTNADIVI FFVSADFIAS DYCYKNEVIK SVERHNQGHC TVVPVILREC
DWEGAPFESI HGLPTDMKPV VSKHWNDTDE AFTNIVRELK KIIKKKFSDK EKLNFVNNKK
SIKFILRSGV SGQEFDIEAP SSSTVKELLD ELIKNETLDR DYEYIFILKY NSQQLELNQT
LFDCQVRDGD TILASTTSRK