Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6204 |
Symbol | |
ID | 8729987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7517060 |
End bp | 7517842 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | TIR protein |
Protein accession | YP_003390962 |
Protein GI | 284041032 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.396579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC AAAGCACTAA CTCTACTGAT AAGAGAGAAA TAAAACTGGA AGAGAGAAAA GTTAATATTT TTTATTCCTA TTCGCACCGG GATGAAGAGT TGCGTGAACG GTTTGAAGTA CACATGGCCG GATTAAAACG AAAAGGTTTG ATCGAAGAAT GGCATGATCG AAAGATTTTA TCAGGGCAGA ATTTTGAGAA TGCGATTGAC AAGAATCTGA CCAATGCAGA CATTGTTATC TTTTTTGTAA GTGCTGACTT TATCGCTTCG GACTATTGCT ATAAAAATGA AGTAATAAAA TCCGTAGAGC GGCATAACCA AGGGCACTGC ACCGTAGTAC CCGTAATTTT AAGGGAATGC GACTGGGAGG GCGCACCGTT TGAAAGTATT CATGGCTTAC CAACAGATAT GAAACCGGTA GTGAGTAAAC ACTGGAATGA TACGGATGAA GCCTTCACCA ATATTGTAAG AGAGCTGAAG AAAATTATCA AGAAAAAATT CTCCGATAAA GAAAAACTCA ACTTTGTCAA TAATAAAAAG TCTATAAAAT TTATTTTGAG AAGTGGTGTC AGCGGCCAGG AGTTCGACAT AGAAGCGCCA TCATCATCTA CGGTAAAGGA GCTACTAGAT GAATTGATAA AGAATGAAAC GCTCGACCGC GATTACGAAT ACATATTTAT TCTAAAATAC AACTCACAAC AACTGGAGTT AAATCAGACG CTATTCGATT GCCAGGTAAG GGATGGGGAC ACTATACTTG CCTCAACGAC ATCACGTAAA TAG
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Protein sequence | MKTQSTNSTD KREIKLEERK VNIFYSYSHR DEELRERFEV HMAGLKRKGL IEEWHDRKIL SGQNFENAID KNLTNADIVI FFVSADFIAS DYCYKNEVIK SVERHNQGHC TVVPVILREC DWEGAPFESI HGLPTDMKPV VSKHWNDTDE AFTNIVRELK KIIKKKFSDK EKLNFVNNKK SIKFILRSGV SGQEFDIEAP SSSTVKELLD ELIKNETLDR DYEYIFILKY NSQQLELNQT LFDCQVRDGD TILASTTSRK
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