| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6190 |
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| Symbol | |
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| ID | 8729973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7497696 |
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| End bp | 7499618 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | glycoside hydrolase family 2 sugar binding protein |
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| Protein accession | YP_003390948 |
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| Protein GI | 284041018 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTA ATCAAACTCT ATTCACGCCA TTAGGGCTCC TGCTGCTGAC TACGGGCCTT
GCCGTTGCGC AATCGCCCGC CCAGAATACG CCCCGAACGG CCCCCATCAT GAGCCGGTGG
GAGAAGCAGC TAACGCCGGA GAACGCCTGG CGTGAATACC CGCGTCCGCA GATGGTCCGC
AAACAATGGC AGAACCTGAA CGGTATGTGG GACTATGCCA TTACGGCCAA AACCGCTCCC
CAGCCAACCG ATTTTTCGGG GCAGATTCTC GTACCCTTCA GCGTAGAGTC GACGGTGTCG
AAAGTCAATA AATCACTCAC TGCCGACCAG CGTTTGTGGT ACCGTCGTAC CGTTAGCGTA
CCCGCCGACT GGGCCGGACA ACGGGTGCTG CTGCACTTCG GCGCGGTAGA TTATGAATGC
AGCCTGTGGG TCAATGGCGG GCTGGTGGGT TCGCATACCG GCGGTTTGGA TGCGTTTAGC
TTCGACATTA CCGATTACCT GAAAGACGGC CAGAATCAAC TCGTACTGGG CGTACTCGAC
CCTACCTCAA CGGGCGAACA GCCACGCGGC AAACAGTTGA TGAACCCGAA TGGCATCTGG
TACACGCCCG TGTCGGGCAT CTGGCAAACG GTCTGGATGG AGCCGGTGCC GAAGCAGACC
TACATCGAAG AGGTGAAACT CACCCCCGAA CTGGATTCGG GCCGGGTTCG GGTCGATGTG
CTGCTCGACA AACCCGCTAA CAACTACACC ACTGCCATTC GATTGACGGC GATGGACGGC
AACCGAACCG TTGCCACAAC GCTCGTTCGT GCCGGGCGGA CGGGGTACCT TTCGGTGAAA
AACCCCAAAC TCTGGTCGCC CGATAGCCCG TTCCTGTATG ACTTTAAAGC CGAACTGGTT
ACCGTAACGG ACCCTTTTGG CGATACGCCC CGCAATAAAC GCCCGCGTCA GGATGATGCC
CTGAACAAGG CCTTCGCCGG TGCTACCGTA ACGGGCAATC CGCTCGATGT GGTAACCGGC
TACTTTGCCA TGCGGAAAAT TGCGACGGGG AAAGGTCCGG TAGCCAACCA GCCGGTATTG
CTGCTGAACA ACAAATTTGT TTTCCAGAAT GGCCCGCTCG ATCAGGGCTG GTGGCCCGGC
AGTTTACTGA CGCCCCCTTC GGATGACGCG ATGGCCTTTG AAATTGACTT CCTGAAAAAG
TCGGGCTTCA ACATGCTCCG TAAGCACATC AAAGTAGAGC CTGACCGCTA TTATTACCTG
TGTGATAAGA TGGGCATGCT GGTTTGGCAG GATATGCCGT CGGGCTTTCT GGAAGGCCAG
AACGAAGCCC CCGGCGATCA GACGGAGCCC ATTCGCCGGT CGAAGGCGAA AGAACAGTTT
GAACTGGAGC TACGCCGGAT GATGAACCGC CTGCATAACC ACCCCAGCAT TGTTACCTGG
GTGGTGCATA ACGAAGGCTG GGGCCAGTAC GACAACAAAC GCCTGGCCGA TTGGGTGAAA
GCCCTCGACC CCAGCCGGAC CGTTAACGCC AGCAGCGGCT GGAACGACCT CGGCGCGGGC
GATTTCTACG ATATTCATAC CTACGAGCCG GAACCCAACG CACCAGCACC CAAAACCGAC
CGCGTGGTAG TTATTGGCGA ATTTGGCGGC ATCGGCTGGC CGGTACAGGG TCATCTCTGG
AACCCAGAGA TGCGGAACTG GGGCTACCAG ACGTATCAAT CGGCCGACGA GGTGCTGAAA
GCCTACCAGA AGAAATACGC CAAAATCGTG GAGTATTATC AGAAACAGGC GCTGTCGGCG
GCAGTGTATA CCCAAACGAC GGACGTGGAA GGCGAAGTCA ACGGCCTGCT TACGTACGAC
CGAGAGGTAA TCAAAATACC TATCGAAACG CTGAAAAAGA TTCACGCGCC TTTGTTTAAG
TAA
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| Protein sequence | MRFNQTLFTP LGLLLLTTGL AVAQSPAQNT PRTAPIMSRW EKQLTPENAW REYPRPQMVR
KQWQNLNGMW DYAITAKTAP QPTDFSGQIL VPFSVESTVS KVNKSLTADQ RLWYRRTVSV
PADWAGQRVL LHFGAVDYEC SLWVNGGLVG SHTGGLDAFS FDITDYLKDG QNQLVLGVLD
PTSTGEQPRG KQLMNPNGIW YTPVSGIWQT VWMEPVPKQT YIEEVKLTPE LDSGRVRVDV
LLDKPANNYT TAIRLTAMDG NRTVATTLVR AGRTGYLSVK NPKLWSPDSP FLYDFKAELV
TVTDPFGDTP RNKRPRQDDA LNKAFAGATV TGNPLDVVTG YFAMRKIATG KGPVANQPVL
LLNNKFVFQN GPLDQGWWPG SLLTPPSDDA MAFEIDFLKK SGFNMLRKHI KVEPDRYYYL
CDKMGMLVWQ DMPSGFLEGQ NEAPGDQTEP IRRSKAKEQF ELELRRMMNR LHNHPSIVTW
VVHNEGWGQY DNKRLADWVK ALDPSRTVNA SSGWNDLGAG DFYDIHTYEP EPNAPAPKTD
RVVVIGEFGG IGWPVQGHLW NPEMRNWGYQ TYQSADEVLK AYQKKYAKIV EYYQKQALSA
AVYTQTTDVE GEVNGLLTYD REVIKIPIET LKKIHAPLFK
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